RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 TFDP3Q5H9I0 405 aa8.41□□□□□ -1.06
HMGCR-202ENST00000343975 FAM78AQ5JUQ0 283 aa8.41□□□□□ -1.06
HMGCR-202ENST00000343975 TFAP2DQ7Z6R9 452 aa8.41□□□□□ -1.06
HMGCR-202ENST00000343975 MFSD6LQ8IWD5 586 aa8.41□□□□□ -1.06
HMGCR-202ENST00000343975 WFIKKN2Q8TEU8 576 aa8.41□□□□□ -1.06
HMGCR-202ENST00000343975 PIWIL1Q96J94 861 aaKnown RBP8.41□□□□□ -1.06
HMGCR-202ENST00000343975 RUNDC3BQ96NL0 473 aa8.41□□□□□ -1.06
HMGCR-202ENST00000343975 ASB16Q96NS5 453 aa8.41□□□□□ -1.06
HMGCR-202ENST00000343975 ZNF670Q9BS34 389 aa8.41□□□□□ -1.06
HMGCR-202ENST00000343975 HEMGNQ9BXL5 484 aa8.41□□□□□ -1.06
HMGCR-202ENST00000343975 C8orf33Q9H7E9 229 aaPredicted RBP8.41□□□□□ -1.06
HMGCR-202ENST00000343975 CTAGE15A4D2H0 777 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 ZSCAN5CA6NGD5 496 aaPredicted RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 E7EVH7 732 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 KRIT1O00522 736 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 ECI2O75521 394 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 VNN2O95498 520 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 CTAGE8P0CG41 777 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 RHOQP17081 205 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 CDH4P55283 916 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 SULT2A1Q06520 285 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 AUHQ13825 339 aaKnown RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 PRPSAP1Q14558 356 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 STARD3Q14849 445 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 LLGL1Q15334 1064 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 DARS2Q6PI48 645 aaKnown RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 CTAGE6Q86UF2 777 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 CTAGE4Q8IX94 777 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 CEP112Q8N8E3 955 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 USP13Q92995 863 aaPredicted RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 KLF16Q9BXK1 252 aaPredicted RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 GOLPH3Q9H4A6 298 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 ATP13A1Q9HD20 1204 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 ARHGEF4Q9NR80 690 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 CLEC1BQ9P126 229 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 CAPN6Q9Y6Q1 641 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 MAN2B1O00754 1011 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 NDC80O14777 642 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 BNIP3LO60238 219 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 CST8O60676 142 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 CA4P22748 312 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 MLLT6P55198 1093 aaPredicted RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 HDAC4P56524 1084 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 GRSF1Q12849 480 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 TDGQ13569 410 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 POLD3Q15054 466 aaPredicted RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 STXBP5Q5T5C0 1151 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 TIGD7Q6NT04 549 aaPredicted RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 METTL3Q86U44 580 aaKnown RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 CCDC105Q8IYK2 499 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 KATNAL2Q8IYT4 538 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 C17orf53Q8N3J3 647 aaPredicted RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 ELSPBP1Q96BH3 223 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 GUCD1Q96NT3 240 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 TRIM7Q9C029 511 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 RETREG1Q9H6L5 497 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 PACSIN2Q9UNF0 486 aaPredicted RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 REXO2Q9Y3B8 237 aaKnown RBP8.4□□□□□ -1.06
HMGCR-202ENST00000343975 PCDHA3Q9Y5H8 950 aa8.4□□□□□ -1.06
HMGCR-202ENST00000343975 E9PAM4 449 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 CHADO15335 359 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 IFNB1P01574 187 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 DGKGP49619 791 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 YBEYP58557 167 aaPredicted RBP8.4□□□□□ -1.07
HMGCR-202ENST00000343975 DLX2Q07687 328 aaPredicted RBP8.4□□□□□ -1.07
HMGCR-202ENST00000343975 CCDC15Q0P6D6 951 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 ZNF211Q13398 564 aaPredicted RBP8.4□□□□□ -1.07
HMGCR-202ENST00000343975 RUNX3Q13761 415 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 TCEAL1Q15170 157 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 SLC5A9Q2M3M2 681 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 HEATR6Q6AI08 1181 aaKnown RBP8.4□□□□□ -1.07
HMGCR-202ENST00000343975 RFWD3Q6PCD5 774 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 HTR3DQ70Z44 454 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 LRRC49Q8IUZ0 686 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 NDUFAF2Q8N183 169 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 OSCP1Q8WVF1 389 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 ATXN2LQ8WWM7 1075 aaKnown RBP8.4□□□□□ -1.07
HMGCR-202ENST00000343975 MYADMQ96S97 322 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 SPHK2Q9NRA0 654 aa8.4□□□□□ -1.07
HMGCR-202ENST00000343975 AGO1Q9UL18 857 aaKnown RBP8.4□□□□□ -1.07
HMGCR-202ENST00000343975 TRDMT1O14717 391 aaKnown RBP8.39□□□□□ -1.07
HMGCR-202ENST00000343975 FGGP02679 453 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 GGCXP38435 758 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 MAPKAPK2P49137 400 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 LY6G5CQ5SRR4 150 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 SPOCD1Q6ZMY3 1216 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 RFX8Q6ZV50 586 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 TRMT11Q7Z4G4 463 aaKnown RBP8.39□□□□□ -1.07
HMGCR-202ENST00000343975 BBS7Q8IWZ6 715 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 KIAA1958Q8N8K9 716 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 C1orf74Q96LT6 269 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 BRD8Q9H0E9 1235 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 RNF38Q9H0F5 515 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 EBF3Q9H4W6 596 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 DYRK4Q9NR20 520 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 PLK2Q9NYY3 685 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 NUMBLQ9Y6R0 609 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 CFAP69A5D8W1 941 aa8.39□□□□□ -1.07
HMGCR-202ENST00000343975 SYNCRIPO60506 623 aaKnown RBP8.39□□□□□ -1.07
HMGCR-202ENST00000343975 KDELR1P24390 212 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms