RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 SHC3Q92529 594 aa9□□□□□ -0.97
SP140-201ENST00000343805 ARHGEF2Q92974 986 aaKnown RBP9□□□□□ -0.97
SP140-201ENST00000343805 TMEM143Q96AN5 459 aa9□□□□□ -0.97
SP140-201ENST00000343805 TLCD1Q96CP7 247 aa9□□□□□ -0.97
SP140-201ENST00000343805 ATG4CQ96DT6 458 aa9□□□□□ -0.97
SP140-201ENST00000343805 NRBF2Q96F24 287 aa9□□□□□ -0.97
SP140-201ENST00000343805 METTL2AQ96IZ6 378 aaKnown RBP9□□□□□ -0.97
SP140-201ENST00000343805 CEP19Q96LK0 163 aa9□□□□□ -0.97
SP140-201ENST00000343805 FARSBQ9NSD9 589 aaKnown RBP9□□□□□ -0.97
SP140-201ENST00000343805 FGFR1OP2Q9NVK5 253 aa9□□□□□ -0.97
SP140-201ENST00000343805 UVRAGQ9P2Y5 699 aa9□□□□□ -0.97
SP140-201ENST00000343805 PCDHA3Q9Y5H8 950 aa9□□□□□ -0.97
SP140-201ENST00000343805 PFASO15067 1338 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 BHMG1C9JSJ3 638 aaPredicted RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 VILLO15195 856 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 THAP12O43422 761 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 ZNF862O60290 1169 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 SFTPCP11686 197 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 KRT10P13645 584 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 CTNNA2P26232 953 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 PPARGP37231 505 aaPredicted RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 ITGA8P53708 1063 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 STRN3Q13033 797 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 AUHQ13825 339 aaKnown RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 LPIN1Q14693 890 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 IGSF11Q5DX21 431 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 C6orf118Q5T5N4 469 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 C1orf228Q6PIY5 440 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 TMEM270Q6UE05 265 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 C6orf15Q6UXA7 325 aaPredicted RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 LRRC69Q6ZNQ3 347 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 CYP4V2Q6ZWL3 525 aaPredicted RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 COL26A1Q96A83 441 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 ALPK1Q96QP1 1244 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 FERD3LQ96RJ6 166 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 TTPALQ9BTX7 342 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 SAMD15Q9P1V8 674 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 TMEM120BA0PK00 339 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 WDR64B1ANS9 1081 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 TCP11X1B4DZS4 312 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 IFRD1O00458 451 aaPredicted RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 SULT1B1O43704 296 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 ATP5HO75947 161 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 OR5F1O95221 314 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 CELA3AP09093 270 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 ATF7P17544 494 aaPredicted RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 RPL9P32969 192 aaKnown RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 PCYT1AP49585 367 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 PSMD6Q15008 389 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 STYK1Q6J9G0 422 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 METTL2BQ6P1Q9 378 aaKnown RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 ZNF449Q6P9G9 518 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 LRRTM3Q86VH5 581 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 SRRM1Q8IYB3 904 aaKnown RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 C7orf43Q8WVR3 580 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 SGF29Q96ES7 293 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 PDCD2LQ9BRP1 358 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 MRPL1Q9BYD6 325 aaKnown RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 IMPG2Q9BZV3 1241 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 NEK6Q9HC98 313 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 FANCFQ9NPI8 374 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 C1orf112Q9NSG2 853 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 PRKAG3Q9UGI9 489 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 PCYOX1Q9UHG3 505 aa8.99□□□□□ -0.97
SP140-201ENST00000343805 MRPS23Q9Y3D9 190 aaKnown RBP8.99□□□□□ -0.97
SP140-201ENST00000343805 LRRIQ4A6NIV6 560 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 VSTM5A8MXK1 200 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 SLC22A1O15245 554 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 FGF18O76093 207 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 DDHD2O94830 711 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 ARHGEF15O94989 841 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 KRT75O95678 551 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 NUDT17P0C025 328 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 VCLP18206 1134 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 CRABP2P29373 138 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 PRKAR1BP31321 381 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 NSFP46459 744 aaKnown RBP8.98□□□□□ -0.97
SP140-201ENST00000343805 LIG4P49917 911 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 POLR2GP62487 172 aaKnown RBP eCLIP8.98□□□□□ -0.97
SP140-201ENST00000343805 AP1B1Q10567 949 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 SMARCB1Q12824 385 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 SIX1Q15475 284 aaPredicted RBP8.98□□□□□ -0.97
SP140-201ENST00000343805 KCNJ8Q15842 424 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 ZBTB41Q5SVQ8 909 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 CYP4A22Q5TCH4 519 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 ACAD10Q6JQN1 1059 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 FAM47EQ6ZV65 393 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 ZC3H18Q86VM9 953 aaKnown RBP8.98□□□□□ -0.97
SP140-201ENST00000343805 TRPM4Q8TD43 1214 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 ZNF516Q92618 1163 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 CD101Q93033 1021 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 UTP4Q969X6 686 aaKnown RBP8.98□□□□□ -0.97
SP140-201ENST00000343805 DNAJC1Q96KC8 554 aaKnown RBP8.98□□□□□ -0.97
SP140-201ENST00000343805 MOGAT1Q96PD6 335 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 USP29Q9HBJ7 922 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 TMEM8AQ9HCN3 771 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 TBC1D22BQ9NU19 505 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 ABI2Q9NYB9 513 aaPredicted RBP8.98□□□□□ -0.97
SP140-201ENST00000343805 FNIP2Q9P278 1114 aa8.98□□□□□ -0.97
SP140-201ENST00000343805 FAF1Q9UNN5 650 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms