RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CASTOR2A6NHX0 329 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 OPHN1O60890 802 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 TOMM70O94826 608 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 NCAM1P13591 858 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 CPA2P48052 419 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 CLCNKBP51801 687 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 IFRD2Q12894 506 aaPredicted RBP15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 CRYMQ14894 314 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 PDK1Q15118 436 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 GPR162Q16538 588 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 PAN2Q504Q3 1202 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 STKLD1Q8NE28 680 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 EDEM1Q92611 657 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 ATXN7L3BQ96GX2 97 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 LBHD1Q9BQE6 289 aaPredicted RBP15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 NMUR2Q9GZQ4 415 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 EBF2Q9HAK2 575 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 I6L893 689 aaPredicted RBP15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 FCHO1O14526 889 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 TPP1O14773 563 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 PPP1R12AO14974 1030 aaPredicted RBP15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 FYNP06241 537 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 ERVK-10P10266 1014 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 CBLBQ13191 982 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 FSCN1Q16658 493 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 LRRC8BQ6P9F7 803 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 PPP1R14CQ8TAE6 165 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 TTC8Q8TAM2 541 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 ARNTL2Q8WYA1 636 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 N4BP2L2Q92802 583 aaPredicted RBP15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 PCED1BQ96HM7 432 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 FERMT1Q9BQL6 677 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 SYT15Q9BQS2 421 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 C20orf27Q9GZN8 174 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 XPNPEP3Q9NQH7 507 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 SAR1AQ9NR31 198 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 RCOR3Q9P2K3 495 aaPredicted RBP15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 C15orf41Q9Y2V0 281 aa15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 ENTPD5O75356 428 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 TGDSO95455 350 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 C6orf222P0C671 652 aaPredicted RBP15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 ERCC2P18074 760 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 SERPINB9P50453 376 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 ATG16L1Q676U5 607 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 RFWD3Q6PCD5 774 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 DSTYKQ6XUX3 929 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 FAM35AQ86V20 835 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 RASSF3Q86WH2 238 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 C3orf58Q8NDZ4 430 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 OR52K1Q8NGK4 314 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 SMOQ99835 787 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 PAAF1Q9BRP4 392 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 DDIT4Q9NX09 232 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 CDY2AQ9Y6F7 541 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 PDCD11Q14690 1871 aaKnown RBP15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 LRPAP1P30533 357 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 CRHR1P34998 444 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 TPI1P60174 286 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 DPYSQ14117 519 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 PACS1Q6VY07 963 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 NT5C3BQ969T7 300 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 SLC2A13Q96QE2 648 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 MIOSQ9NXC5 875 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 SIRPGQ9P1W8 387 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 MRPL42Q9Y6G3 142 aaKnown RBP15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 GABRDO14764 452 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 ALDOAP04075 364 aaKnown RBP15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 BPGMP07738 259 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 ADRA1BP35368 520 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 GLUD2P49448 558 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 RPL10AP62906 217 aaKnown RBP15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 TEX44Q53QW1 395 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 STEAP4Q687X5 459 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 PLCD3Q8N3E9 789 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 CDKL2Q92772 493 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 PTCD3Q96EY7 689 aaKnown RBP15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 NSL1Q96IY1 281 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 CADM1Q9BY67 442 aaKnown RBP15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 DENND2DQ9H6A0 471 aaPredicted RBP15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 PPARGC1AQ9UBK2 798 aaKnown RBP15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 ST3GAL5Q9UNP4 418 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 RPS6KL1Q9Y6S9 549 aa15.3■□□□□ 0.04
VIPAS39-202ENST00000343765 UNCXA6NJT0 531 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 KLF11O14901 512 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 DCLK1O15075 740 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 PEX11AO75192 247 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 PGAM1P18669 254 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 KCNA4P22459 653 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 SCNN1GP51170 649 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 AQP5P55064 265 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 DAOAP59103 153 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 PURAQ00577 322 aaKnown RBP15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 PDE1BQ01064 536 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 NIPAL4Q0D2K0 466 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 TAF1CQ15572 869 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 PPM1JQ5JR12 505 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 N4BP2L1Q5TBK1 243 aaPredicted RBP15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 RINLQ6ZS11 566 aa15.29■□□□□ 0.04
VIPAS39-202ENST00000343765 PSTKQ8IV42 348 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms