RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 KCTD21Q4G0X4 260 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 SPOUT1Q5T280 376 aaKnown RBP12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 TMC7Q7Z402 723 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 TUBGCP3Q96CW5 907 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 MRIQ9BWK5 157 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 TXLNGYQ9BZA5 131 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 ELOVL4Q9GZR5 314 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 PCDH18Q9HCL0 1135 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 CLUHO75153 1309 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 FAM200BP0CF97 657 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 STMN1P16949 149 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 IVDP26440 423 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 PEX2P28328 305 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 ALDH1A3P47895 512 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 WNT7BP56706 349 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 AMIGO2Q86SJ2 522 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 XYLT1Q86Y38 959 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 MPP5Q8N3R9 675 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 CATSPER1Q8NEC5 780 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 TRPC7Q9HCX4 862 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 SLC7A8Q9UHI5 535 aa12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 HBS1LQ9Y450 684 aaKnown RBP12.73□□□□□ -0.37
SNRNP48-201ENST00000342415 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 TRDMT1O14717 391 aaKnown RBP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 MAGEB2O15479 319 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 HNRNPLP14866 589 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 MAP4P27816 1152 aaKnown RBP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 NOMO1Q15155 1222 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 DLG2Q15700 870 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 CA9Q16790 459 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 UGP2Q16851 508 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 PPP1R15BQ5SWA1 713 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 DLK2Q6UY11 383 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 NET1Q7Z628 596 aaPredicted RBP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 CLEC4FQ8N1N0 589 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 REPS2Q8NFH8 660 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 RCN3Q96D15 328 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 H3BRB1 525 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 AHCYL1O43865 530 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 COX4I1P13073 169 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 GMPRP36959 345 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 BCAT1P54687 386 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 NAPEPLDQ6IQ20 393 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 ARHGAP22Q7Z5H3 698 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 ST6GALNAC4Q9H4F1 302 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 TUT1Q9H6E5 874 aaKnown RBP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 UTP6Q9NYH9 597 aaKnown RBP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 ANKRD12Q6UB98 2062 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 TIMM44O43615 452 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 SNX2O60749 519 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 SRP72O76094 671 aaKnown RBP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 GRIK1P39086 918 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 HADHAP40939 763 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 PPM1FP49593 454 aaPredicted RBP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 RABGGTBP53611 331 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 CTBP1Q13363 440 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 OTUD3Q5T2D3 398 aaPredicted RBP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 KYAT3Q6YP21 454 aaKnown RBP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 C1orf127Q8N9H9 656 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 EBF3Q9H4W6 596 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 CYP3A43Q9HB55 503 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 SYBUQ9NX95 663 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 HACD3Q9P035 362 aa12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 PRRC2BQ5JSZ5 2229 aaKnown RBP12.72□□□□□ -0.37
SNRNP48-201ENST00000342415 NR5A2O00482 541 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 CLDN5O00501 218 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 TM7SF2O76062 418 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 TAF6P49848 677 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 FBXO47Q5MNV8 452 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 PMF1Q6P1K2 205 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 RHBDF2Q6PJF5 856 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 MARK2Q7KZI7 788 aaKnown RBP12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 MFN1Q8IWA4 741 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 VPS50Q96JG6 964 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 TWNKQ96RR1 684 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 SEPHS2Q99611 448 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 NAT9Q9BTE0 207 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 FICDQ9BVA6 458 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 AFF4Q9UHB7 1163 aaKnown RBP12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 PPM1HQ9ULR3 514 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 SYCE1LA8MT33 242 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 METTL18O95568 372 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 EGFRP00533 1210 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 SERPINA6P08185 405 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 ME2P23368 584 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 EFHBQ8N7U6 833 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 MAB21L3Q8N8X9 362 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 SLC35B2Q8TB61 432 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 BLOC1S5Q8TDH9 187 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 JADE3Q92613 823 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 CERS2Q96G23 380 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 COG4Q9H9E3 785 aa12.71□□□□□ -0.37
SNRNP48-201ENST00000342415 SPATA31C2B4DYI2 1134 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 WFS1O76024 890 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 FAM58BPP0C7Q3 252 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 FOLH1Q04609 750 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 SGO1Q5FBB7 561 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 ZNF470Q6ECI4 717 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 ANGPTL8Q6UXH0 198 aa12.71□□□□□ -0.38
SNRNP48-201ENST00000342415 PACS1Q6VY07 963 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms