RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 E4F1Q66K89 784 aaPredicted RBP15.97■□□□□ 0.15
VAPA-201ENST00000340541 TMEM92Q6UXU6 159 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 TRIM72Q6ZMU5 477 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 MMS22LQ6ZRQ5 1243 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 RASSF3Q86WH2 238 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 ZNF513Q8N8E2 541 aaPredicted RBP15.97■□□□□ 0.15
VAPA-201ENST00000340541 TSTD1Q8NFU3 115 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 SLC30A5Q8TAD4 765 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 TMA16Q96EY4 203 aaKnown RBP15.97■□□□□ 0.15
VAPA-201ENST00000340541 NPY6RQ99463 290 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 SLC2A11Q9BYW1 496 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 NUCKS1Q9H1E3 243 aaKnown RBP15.97■□□□□ 0.15
VAPA-201ENST00000340541 FAM204AQ9H8W3 233 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 TMEM59LQ9UK28 342 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 LRRC53A6NM62 1247 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 FERP16591 822 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 FLT3P36888 993 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 TPM4P67936 248 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 CENPCQ03188 943 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 CLEC16AQ2KHT3 1053 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 MS4A13Q5J8X5 152 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 MPP7Q5T2T1 576 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 FAM102AQ5T9C2 384 aaPredicted RBP15.96■□□□□ 0.15
VAPA-201ENST00000340541 NUDT18Q6ZVK8 323 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 ACOX2Q99424 681 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 AGPAT1Q99943 283 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.96■□□□□ 0.15
VAPA-201ENST00000340541 DDIT4Q9NX09 232 aa15.96■□□□□ 0.15
VAPA-201ENST00000340541 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.96■□□□□ 0.15
VAPA-201ENST00000340541 KMT2BQ9UMN6 2715 aaPredicted RBP15.95■□□□□ 0.14
VAPA-201ENST00000340541 GOLGA6L19H0YKK7 550 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 GOLGA8SH3BPF8 625 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 ALDH1A2O94788 518 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 MOCS2O96007 188 aaPredicted RBP15.95■□□□□ 0.14
VAPA-201ENST00000340541 APOEP02649 317 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 HLA-FP30511 346 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 RNASE9P60153 205 aaKnown RBP15.95■□□□□ 0.14
VAPA-201ENST00000340541 RPS24P62847 133 aaKnown RBP15.95■□□□□ 0.14
VAPA-201ENST00000340541 SHC2P98077 582 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 CCDC6Q16204 474 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 FIGNQ5HY92 759 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 TMEM215Q68D42 235 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 ARCQ7LC44 396 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 BNIPLQ7Z465 357 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 KIAA0907Q7Z7F0 614 aaPredicted RBP15.95■□□□□ 0.14
VAPA-201ENST00000340541 PHF13Q86YI8 300 aaPredicted RBP15.95■□□□□ 0.14
VAPA-201ENST00000340541 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.95■□□□□ 0.14
VAPA-201ENST00000340541 MSANTD4Q8NCY6 345 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 WFDC5Q8TCV5 224 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 LMLNQ96KR4 655 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 BTN2A3PQ96KV6 586 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 PRMT1Q99873 361 aaKnown RBP15.95■□□□□ 0.14
VAPA-201ENST00000340541 DDX50Q9BQ39 737 aaKnown RBP15.95■□□□□ 0.14
VAPA-201ENST00000340541 C11orf70Q9BRQ4 267 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 CD248Q9HCU0 757 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 RXFP3Q9NSD7 469 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 PIGVQ9NUD9 493 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 RRN3Q9NYV6 651 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 CNOT1A5YKK6 2376 aaKnown RBP15.95■□□□□ 0.14
VAPA-201ENST00000340541 CACNA1BQ00975 2339 aa15.95■□□□□ 0.14
VAPA-201ENST00000340541 SYNJ2BP-COX16A0A087WUM0 186 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 I6L893 689 aaPredicted RBP15.94■□□□□ 0.14
VAPA-201ENST00000340541 M0QYT0 321 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 TBL1XO60907 577 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 TACR2P21452 398 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 PMLP29590 882 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 NTSR1P30989 418 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 CCR1P32246 355 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 GBP1P32455 592 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 GSCP56915 257 aaPredicted RBP15.94■□□□□ 0.14
VAPA-201ENST00000340541 UBASH3AP57075 661 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 CREB5Q02930 508 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 NME3Q13232 169 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 BYSLQ13895 437 aaKnown RBP15.94■□□□□ 0.14
VAPA-201ENST00000340541 SPDYCQ5MJ68 293 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 EOGTQ5NDL2 527 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 RAP1GAP2Q684P5 730 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 PMS2CLQ68D20 193 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 LRSAM1Q6UWE0 723 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 ANKS1BQ7Z6G8 1248 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 HJURPQ8NCD3 748 aaPredicted RBP15.94■□□□□ 0.14
VAPA-201ENST00000340541 PGAP3Q96FM1 320 aaPredicted RBP15.94■□□□□ 0.14
VAPA-201ENST00000340541 TBCBQ99426 244 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 GABRG3Q99928 467 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 EDEM3Q9BZQ6 932 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 ANLNQ9NQW6 1124 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 AIPL1Q9NZN9 384 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 COX16Q9P0S2 106 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 ANGPTL2Q9UKU9 493 aa15.94■□□□□ 0.14
VAPA-201ENST00000340541 MUC22E2RYF6 1773 aaPredicted RBP15.94■□□□□ 0.14
VAPA-201ENST00000340541 A0A1W2PQF6 199 aa15.93■□□□□ 0.14
VAPA-201ENST00000340541 TCRBV5S1A1TA0A578 114 aa15.93■□□□□ 0.14
VAPA-201ENST00000340541 DCLK1O15075 740 aa15.93■□□□□ 0.14
VAPA-201ENST00000340541 SLC2A3P11169 496 aa15.93■□□□□ 0.14
VAPA-201ENST00000340541 WASP42768 502 aa15.93■□□□□ 0.14
VAPA-201ENST00000340541 CXCR3P49682 368 aa15.93■□□□□ 0.14
VAPA-201ENST00000340541 SULT1E1P49888 294 aa15.93■□□□□ 0.14
VAPA-201ENST00000340541 ENPP2Q13822 863 aa15.93■□□□□ 0.14
VAPA-201ENST00000340541 SLC25A52Q3SY17 297 aa15.93■□□□□ 0.14
VAPA-201ENST00000340541 N4BP2L1Q5TBK1 243 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms