RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CLUHO75153 1309 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 LRRC72A6NJI9 287 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 EXD1Q8NHP7 514 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 NAALADL1Q9UQQ1 740 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 ESYT3A0FGR9 886 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 OR56A5P0C7T3 313 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 OAS2P29728 719 aaKnown RBP13.14□□□□□ -0.31
LIN54-201ENST00000340417 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 BCAS3Q9H6U6 928 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 RGS18Q9NS28 235 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 SQORQ9Y6N5 450 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 ADGRA3Q8IWK6 1321 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 NUP188Q5SRE5 1749 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 GJB6O95452 261 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 SOD2P04179 222 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 KCNJ1P48048 391 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 SERPINB9P50453 376 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 SPARCL1Q14515 664 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.14□□□□□ -0.31
LIN54-201ENST00000340417 FIGNQ5HY92 759 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 SLC13A5Q86YT5 568 aaPredicted RBP13.14□□□□□ -0.31
LIN54-201ENST00000340417 HDDC3Q8N4P3 179 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 CXorf40BQ96DE9 158 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 PCED1BQ96HM7 432 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 MSI1O43347 362 aaKnown RBP13.14□□□□□ -0.31
LIN54-201ENST00000340417 GGCXP38435 758 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 SLC10A6Q3KNW5 377 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 EPM2AIP1Q7L775 607 aaPredicted RBP13.14□□□□□ -0.31
LIN54-201ENST00000340417 TC2NQ8N9U0 490 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 MYRIPQ8NFW9 859 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 FRMD8Q9BZ67 464 aaPredicted RBP13.14□□□□□ -0.31
LIN54-201ENST00000340417 FAM153AQ9UHL3 310 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 TRHDEQ9UKU6 1024 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 O00370 1275 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 WNT7AO00755 349 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 MAGEC1O60732 1142 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 KELP23276 732 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 DDX6P26196 483 aaKnown RBP eCLIP13.14□□□□□ -0.31
LIN54-201ENST00000340417 BOP1Q14137 746 aaKnown RBP13.14□□□□□ -0.31
LIN54-201ENST00000340417 BMT2Q1RMZ1 405 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 NCLNQ969V3 563 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 FAM84AQ96KN4 292 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 BTN2A3PQ96KV6 586 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 FAM129AQ9BZQ8 928 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 NSUN3Q9H649 340 aaKnown RBP13.14□□□□□ -0.31
LIN54-201ENST00000340417 GULP1Q9UBP9 304 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 PLAAQ9Y263 795 aa13.14□□□□□ -0.31
LIN54-201ENST00000340417 PSMD12O00232 456 aaPredicted RBP13.13□□□□□ -0.31
LIN54-201ENST00000340417 ITGB6P18564 788 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 NR2C2P49116 596 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 BRMS1LQ5PSV4 323 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 E4F1Q66K89 784 aaPredicted RBP13.13□□□□□ -0.31
LIN54-201ENST00000340417 C12orf56Q8IXR9 622 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 SH3RF2Q8TEC5 729 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 TRIM51Q9BSJ1 452 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 PACSIN1Q9BY11 444 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 CAPN10Q9HC96 672 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 PGAP2Q9UHJ9 254 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 FSBPO95073 299 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 SGO1Q5FBB7 561 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 EMBQ6PCB8 327 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 PTAR1Q7Z6K3 402 aaPredicted RBP13.13□□□□□ -0.31
LIN54-201ENST00000340417 C4orf32Q8N8J7 132 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 SLC26A7Q8TE54 656 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 FAM136AQ96C01 138 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 BCO2Q9BYV7 579 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 SFXN1Q9H9B4 322 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 FLRT1Q9NZU1 646 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 L1RE1Q9UN81 338 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 E2F8A0AVK6 867 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 CLDN11O75508 207 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 WARSP23381 471 aaKnown RBP13.13□□□□□ -0.31
LIN54-201ENST00000340417 CELF5Q8N6W0 485 aaKnown RBP13.13□□□□□ -0.31
LIN54-201ENST00000340417 SPATA20Q8TB22 786 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 FAM167BQ9BTA0 163 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 DNPEPQ9ULA0 475 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 MYH2Q9UKX2 1941 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 SIGLEC16A6NMB1 481 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 SERAC1Q96JX3 654 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 SUSD3Q96L08 255 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 C16orf70Q9BSU1 422 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 FBXL5Q9UKA1 691 aa13.13□□□□□ -0.31
LIN54-201ENST00000340417 TADA3O75528 432 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 ZNF7P17097 686 aaPredicted RBP13.12□□□□□ -0.31
LIN54-201ENST00000340417 TAF11Q15544 211 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 NUDCD3Q8IVD9 361 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 CACNA2D3Q8IZS8 1091 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 CNPY4Q8N129 248 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 IRF7Q92985 503 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 MLPHQ9BV36 600 aaPredicted RBP13.12□□□□□ -0.31
LIN54-201ENST00000340417 RNF39Q9H2S5 420 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 NCDNQ9UBB6 729 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 SDR42E2A6NKP2 422 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 TGFB1I1O43294 461 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 SPAG6O75602 509 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 RB1P06400 928 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 POU6F1Q14863 301 aa13.12□□□□□ -0.31
LIN54-201ENST00000340417 DIS3LQ8TF46 1054 aaKnown RBP13.12□□□□□ -0.31
LIN54-201ENST00000340417 IGSF21Q96ID5 467 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms