RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 C4orf50Q6ZRC1 276 aa15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 PDZD4Q76G19 769 aaPredicted RBP15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 BNIPLQ7Z465 357 aa15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 ATP11CQ8NB49 1132 aa15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 ZMIZ2Q8NF64 920 aa15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 ZNF461Q8TAF7 563 aa15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 MICAL1Q8TDZ2 1067 aa15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 NTAN1Q96AB6 310 aa15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 CSPG4P5Q96PW8 444 aa15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 KCTD15Q96SI1 283 aaPredicted RBP15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 SELENOSQ9BQE4 189 aa15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.69■□□□□ 0.15e-11■□□□□ 9.5
TUBB4B-201ENST00000340384 TMEM51Q9NW97 253 aa15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 XPO7Q9UIA9 1087 aaKnown RBP15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 COL4A4P53420 1690 aaPredicted RBP15.69■□□□□ 0.1
TUBB4B-201ENST00000340384 PER2O15055 1255 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 STK10O94804 968 aaKnown RBP15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 LTFP02788 710 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 CPB1P15086 417 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 TFE3P19532 575 aaPredicted RBP15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 BDNFP23560 247 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 SLCO1A2P46721 670 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 NDUFV1P49821 464 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 ADGRE1Q14246 886 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 SLC45A4Q5BKX6 768 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 FAM131BQ86XD5 332 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 ZBED8Q8IZ13 594 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 DCP1BQ8IZD4 617 aaKnown RBP15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 CCDC185Q8N715 623 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 PYROXD1Q8WU10 500 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 PGAP3Q96FM1 320 aaPredicted RBP15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 KCNK16Q96T55 309 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 LMAN2LQ9H0V9 348 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 PRDM12Q9H4Q4 367 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 FETUBQ9UGM5 382 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 SSX2IPQ9Y2D8 614 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 SLC27A5Q9Y2P5 690 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 PATJQ8NI35 1801 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 EXOC1LA0A1B0GW35 172 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 E7ESA3 106 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 TGM5O43548 720 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 SOAT2O75908 522 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 SPATA31D3P0C874 917 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 DUSP4Q13115 394 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 TTC19Q6DKK2 380 aaPredicted RBP15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 SPATA31D4Q6ZUB0 917 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 BEND5Q7L4P6 421 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 TDRPQ86YL5 185 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 PWWP2AQ96N64 755 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 QKIQ96PU8 341 aaKnown RBP eCLIP15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 VPS37BQ9H9H4 285 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 ACTL7BQ9Y614 415 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 RAD54BQ9Y620 910 aa15.68■□□□□ 0.1
TUBB4B-201ENST00000340384 TMEM265A0A087WTH1 108 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 NDUFAB1O14561 156 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 CLASP2O75122 1294 aaKnown RBP15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 SPAG6O75602 509 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 CA8P35219 290 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 GPR15P49685 360 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 CLCN4P51793 760 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 SCAPQ12770 1279 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 CBLBQ13191 982 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 RASA2Q15283 850 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 SPATS2Q86XZ4 545 aaKnown RBP15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 SPATA2LQ8IUW3 424 aaPredicted RBP15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 SLC7A14Q8TBB6 771 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 RNF139Q8WU17 664 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 SLC22A17Q8WUG5 538 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 ARHGEF2Q92974 986 aaKnown RBP15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 MRPL38Q96DV4 380 aaKnown RBP15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 C10orf88Q9H8K7 445 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 USP29Q9HBJ7 922 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 MTMR10Q9NXD2 777 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 ABI2Q9NYB9 513 aaPredicted RBP15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 AFF4Q9UHB7 1163 aaKnown RBP15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 SLC24A2Q9UI40 661 aa15.67■□□□□ 0.1
TUBB4B-201ENST00000340384 GMNCA6NCL1 334 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 HHLA1C9JL84 531 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 GCATO75600 419 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 NCAM1P13591 858 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 RBL1P28749 1068 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 ATXN1P54253 815 aaKnown RBP15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 IFI35P80217 286 aaPredicted RBP15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 NME3Q13232 169 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 KCNC3Q14003 757 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 NFE2Q16621 373 aaPredicted RBP15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 KLHL38Q2WGJ6 581 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 UBAP2Q5T6F2 1119 aaKnown RBP15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 TPGS2Q68CL5 300 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 HEATR6Q6AI08 1181 aaKnown RBP15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 PDE12Q6L8Q7 609 aaKnown RBP15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 B4GALNT4Q76KP1 1039 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 TADA2BQ86TJ2 420 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 RBM23Q86U06 439 aaKnown RBP15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 PALM2Q8IXS6 379 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 VN1R2Q8NFZ6 395 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 TFB1MQ8WVM0 346 aaKnown RBP15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 FAM161BQ96MY7 647 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 LRRC4CQ9HCJ2 640 aa15.66■□□□□ 0.1
TUBB4B-201ENST00000340384 RAB6BQ9NRW1 208 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms