RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 TAZQ16635 292 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 C5orf22Q49AR2 442 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 ODF2Q5BJF6 829 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 ARTNQ5T4W7 220 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 FAM72AQ5TYM5 149 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 FAM72DQ6L9T8 149 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 LRRC31Q6UY01 552 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 SYT10Q6XYQ8 523 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 C14orf80Q86SX3 495 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 FAM72BQ86X60 149 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 OSCP1Q8WVF1 389 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 FGF14Q92915 247 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 NXPE3Q969Y0 559 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 KXD1Q9BQD3 176 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 ZNF670Q9BS34 389 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 CARD9Q9H257 536 aa18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 PPARGC1AQ9UBK2 798 aaKnown RBP18.48■□□□□ 0.55
SDCBP2-201ENST00000339987 IGLV3-10A0A075B6K4 115 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 E9PAM4 449 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 H3BRJ5 948 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 FANCGO15287 622 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 LRIG2O94898 1065 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 IL9P15248 144 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 PSMC3P17980 439 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 SP100P23497 879 aaPredicted RBP18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 HOXC13P31276 330 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 GGCXP38435 758 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 ARL4AP40617 200 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 COPS2P61201 443 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 PDGFRLQ15198 375 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 PPP6R3Q5H9R7 873 aaPredicted RBP18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 DCAF12L1Q5VU92 463 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 PAPD7Q5XG87 772 aaKnown RBP18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 FBXL22Q6P050 247 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 LGI2Q8N0V4 545 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 FAF2Q96CS3 445 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 RPGRIP1Q96KN7 1286 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 PLA2G2FQ9BZM2 168 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 DUS2Q9NX74 493 aaKnown RBP18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 VANGL2Q9ULK5 521 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 SNX12Q9UMY4 172 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 NEU3Q9UQ49 428 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 WNT6Q9Y6F9 365 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 NUMBLQ9Y6R0 609 aa18.47■□□□□ 0.55
SDCBP2-201ENST00000339987 DRGXA6NNA5 263 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 PI4K2BG5E9Z4 385 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 EEF2KO00418 725 aaKnown RBP18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 KCNK3O14649 394 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 CREB3O43889 395 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 CD48P09326 243 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 PRLRP16471 622 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 CASQ1P31415 396 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 PTPN7P35236 360 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 IFNAR2P48551 515 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 DNA2P51530 1060 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 TPI1P60174 286 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 PPP2R5EQ16537 467 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 RABGAP1LQ5R372 815 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 SPOCD1Q6ZMY3 1216 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 YAF2Q8IY57 180 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 RNF25Q96BH1 459 aaPredicted RBP18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 TBC1D31Q96DN5 1066 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 PRICKLE1Q96MT3 831 aaPredicted RBP18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 RETREG1Q9H6L5 497 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 CWC15Q9P013 229 aaKnown RBP18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 PRKAG3Q9UGI9 489 aa18.46■□□□□ 0.55
SDCBP2-201ENST00000339987 LOC730098B7Z3J9 87 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 PYGMP11217 842 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 GOT1P17174 413 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 TCP1P17987 556 aaKnown RBP18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 IL4RP24394 825 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 CETN2P41208 172 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 CDKN2BP42772 138 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 DPYSQ14117 519 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 EML3Q32P44 896 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 TTC39BQ5VTQ0 682 aaPredicted RBP18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 RFWD3Q6PCD5 774 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 MFSD7Q6UXD7 560 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 RFX8Q6ZV50 586 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 HJURPQ8NCD3 748 aaPredicted RBP18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 PBKQ96KB5 322 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 RPRD1AQ96P16 312 aaPredicted RBP18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 CSPG4P5Q96PW8 444 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 FAM83CQ9BQN1 747 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 CALN1Q9BXU9 219 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 LINC00597Q9H2U6 94 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 PRDM16Q9HAZ2 1276 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 IGSF9Q9P2J2 1179 aa18.45■□□□□ 0.54
SDCBP2-201ENST00000339987 CES2O00748 559 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 CHADO15335 359 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 FGF10O15520 208 aaPredicted RBP18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 SRGAP2O75044 1071 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 MPPE1Q53F39 396 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 TFDP3Q5H9I0 405 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 MPP7Q5T2T1 576 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 RNF43Q68DV7 783 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 CCDC50Q8IVM0 306 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 ADGRG2Q8IZP9 1017 aa18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 ST13P5Q8NFI4 369 aaPredicted RBP18.44■□□□□ 0.54
SDCBP2-201ENST00000339987 ATP2A3Q93084 1043 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms