RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 GRM6O15303 877 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 MAGEC1O60732 1142 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 APOEP02649 317 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 ITGB3P05106 788 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 DLDP09622 509 aaKnown RBP11.12□□□□□ -0.63
RTN3-201ENST00000338850 FAM163BP0C2L3 166 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 SRGAP2CP0DJJ0 459 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 ACADSP16219 412 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 TARSP26639 723 aaKnown RBP11.12□□□□□ -0.63
RTN3-201ENST00000338850 GRM5P41594 1212 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 SERPINB4P48594 390 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 RAP1GDS1P52306 607 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 ARFIP2P53365 341 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 CLNS1AP54105 237 aaKnown RBP11.12□□□□□ -0.63
RTN3-201ENST00000338850 CDC42EP1Q00587 391 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 SEMA5AQ13591 1074 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 BLMHQ13867 455 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 FRG1Q14331 258 aaKnown RBP11.12□□□□□ -0.63
RTN3-201ENST00000338850 TMEM132DQ14C87 1099 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 SMTNL2Q2TAL5 461 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 KBTBD12Q3ZCT8 623 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 ACCSLQ4AC99 568 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 ZNF394Q53GI3 561 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 JADE1Q6IE81 842 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 DARS2Q6PI48 645 aaKnown RBP11.12□□□□□ -0.63
RTN3-201ENST00000338850 OLFML1Q6UWY5 402 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 BZW1Q7L1Q6 419 aaKnown RBP11.12□□□□□ -0.63
RTN3-201ENST00000338850 NPAS4Q8IUM7 802 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 CMTR2Q8IYT2 770 aaKnown RBP11.12□□□□□ -0.63
RTN3-201ENST00000338850 PLD5Q8N7P1 536 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 FAM71DQ8N9W8 422 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 RXFP2Q8WXD0 754 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 SPOCK2Q92563 424 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 CENPIQ92674 756 aaPredicted RBP11.12□□□□□ -0.63
RTN3-201ENST00000338850 TBC1D31Q96DN5 1066 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 HPDLQ96IR7 371 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 NSL1Q96IY1 281 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 QKIQ96PU8 341 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■■□□ 15.5
RTN3-201ENST00000338850 TWNKQ96RR1 684 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 BTBD10Q9BSF8 475 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 NAT9Q9BTE0 207 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 INO80BQ9C086 356 aaPredicted RBP11.12□□□□□ -0.63
RTN3-201ENST00000338850 LMAN2LQ9H0V9 348 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 SMYD3Q9H7B4 428 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 CDHR5Q9HBB8 845 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 PCDH18Q9HCL0 1135 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 CD320Q9NPF0 282 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 STOML1Q9UBI4 398 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
RTN3-201ENST00000338850 CHMP2BQ9UQN3 213 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 PLLPQ9Y342 182 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 MYO7AQ13402 2215 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 TRIP11Q15643 1979 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 TSC2P49815 1807 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 NLRC5Q86WI3 1866 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 TCRBV7S3A2A0A539 114 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 H3BQ06 376 aaPredicted RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 I3L4J1 428 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 COPEO14579 308 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 MGEA5O60502 916 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 DIAPH2O60879 1101 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 ALDH1A2O94788 518 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 ZBED1O96006 694 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 CD48P09326 243 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 MYL4P12829 197 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 PDGFRAP16234 1089 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 IL4RP24394 825 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 SDC4P31431 198 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 SSTR3P32745 418 aaPredicted RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 CRHR1P34998 444 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 FDFT1P37268 417 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 DYNLT1P63172 113 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 SLC6A3Q01959 620 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 OCRLQ01968 901 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 EFTUD2Q15029 972 aaKnown RBP eCLIP11.11□□□□□ -0.633e-9■■■■□ 23.3
RTN3-201ENST00000338850 SLC10A6Q3KNW5 377 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 TAF1BQ53T94 588 aaPredicted RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 SCARA3Q6AZY7 606 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 PTCRAQ6ISU1 281 aaPredicted RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 EFCAB12Q6NXP0 572 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 KYAT3Q6YP21 454 aaKnown RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 C4orf50Q6ZRC1 276 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 FAM183BPQ6ZVS7 135 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 MARK2Q7KZI7 788 aaKnown RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 SLC26A9Q7LBE3 791 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 STRADAQ7RTN6 431 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 LRRC71Q8N4P6 559 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 PQLC3Q8N755 202 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 EMC1Q8N766 993 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 GSDMBQ8TAX9 411 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 TMEM40Q8WWA1 233 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.637e-11■□□□□ 8.6
RTN3-201ENST00000338850 ACSF2Q96CM8 615 aaPredicted RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 PABPC5Q96DU9 382 aaKnown RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 ZNF570Q96NI8 536 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 C1QTNF1Q9BXJ1 281 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 CALN1Q9BXU9 219 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 IQCGQ9H095 443 aaKnown RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 WWP1Q9H0M0 922 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 C1orf21Q9H246 121 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms