RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 RSPO2Q6UXX9 243 aaPredicted RBP16.74■□□□□ 0.27
HPS1-202ENST00000338546 TMEM173Q86WV6 379 aaPredicted RBP16.74■□□□□ 0.27
HPS1-202ENST00000338546 GPR65Q8IYL9 337 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 CMTR2Q8IYT2 770 aaKnown RBP16.74■□□□□ 0.27
HPS1-202ENST00000338546 BCL7CQ8WUZ0 217 aaPredicted RBP16.74■□□□□ 0.27
HPS1-202ENST00000338546 FBXO32Q969P5 355 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 CENPTQ96BT3 561 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 LGMNQ99538 433 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 TTLL2Q9BWV7 592 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 EURLQ9NYK6 297 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 IGSF9Q9P2J2 1179 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 HCSTQ9UBK5 93 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 TRHDEQ9UKU6 1024 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 MFHAS1Q9Y4C4 1052 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 TEX264Q9Y6I9 313 aa16.74■□□□□ 0.27
HPS1-202ENST00000338546 EXOC1LA0A1B0GW35 172 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 GOLGA8MH3BSY2 632 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 PAGE1O75459 146 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 BAIAP3O94812 1187 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 MAP3K6O95382 1288 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 VNN2O95498 520 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 SOD2P04179 222 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 ZDHHC11BP0C7U3 371 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 HPDP32754 393 aaPredicted RBP16.73■□□□□ 0.27
HPS1-202ENST00000338546 GPR15P49685 360 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 KPNA1P52294 538 aaPredicted RBP16.73■□□□□ 0.27
HPS1-202ENST00000338546 NRLP54845 237 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 DMTNQ08495 405 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 AP1B1Q10567 949 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 PSMD5Q16401 504 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 KLHL38Q2WGJ6 581 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 MGAT5BQ3V5L5 792 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 TPGS2Q68CL5 300 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 LEKR1Q6ZMV7 388 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 RNF19BQ6ZMZ0 732 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 B4GALNT4Q76KP1 1039 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 TAS1R1Q7RTX1 841 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 LRRC49Q8IUZ0 686 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 PALM2Q8IXS6 379 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 CCDC13Q8IYE1 715 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 FBXO36Q8NEA4 188 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 OVCA2Q8WZ82 227 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 TBC1D31Q96DN5 1066 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 B3GALT6Q96L58 329 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 VPS37BQ9H9H4 285 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 RC3H2Q9HBD1 1191 aaKnown RBP16.73■□□□□ 0.27
HPS1-202ENST00000338546 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.73■□□□□ 0.27
HPS1-202ENST00000338546 GMIPQ9P107 970 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 MAFFQ9ULX9 164 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 CDY1Q9Y6F8 540 aa16.73■□□□□ 0.27
HPS1-202ENST00000338546 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.73■□□□□ 0.27
HPS1-202ENST00000338546 WASH4PA8MWX3 477 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 UPP2O95045 317 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 METTL18O95568 372 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 LAG3P18627 525 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 MAGEA3P43357 314 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 SLCO1A2P46721 670 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 ATP1A2P50993 1020 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 MLLT6P55198 1093 aaPredicted RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 ARPP19P56211 112 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 USP46P62068 366 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 GNGT1P63211 74 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 FASTKD3Q14CZ7 662 aaKnown RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 BBS9Q3SYG4 887 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 MSS51Q4VC12 460 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 ZNF771Q7L3S4 317 aaPredicted RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 NECAB2Q7Z6G3 386 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 TADA2BQ86TJ2 420 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 CNPY4Q8N129 248 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 TMEM199Q8N511 208 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 CCNYQ8ND76 341 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 PAWRQ96IZ0 340 aaKnown RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 ZNF558Q96NG5 402 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 TSGA13Q96PP4 275 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 UBE2OQ9C0C9 1292 aaKnown RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 ACSS3Q9H6R3 686 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 OSER1Q9NX31 292 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 AFF4Q9UHB7 1163 aaKnown RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 SFMBT1Q9UHJ3 866 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 GREB1Q4ZG55 1949 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 COL4A6Q14031 1691 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 CLUHO75153 1309 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 RNF103O00237 685 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 APRTP07741 180 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 GARSP41250 739 aaKnown RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 PGFP49763 221 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 TBX4P57082 545 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 GPX6P59796 221 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 IFI35P80217 286 aaPredicted RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 DSG1Q02413 1049 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 GAD2Q05329 585 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 RING1Q06587 406 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 WASHC5Q12768 1159 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 DUSP4Q13115 394 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 TRIP4Q15650 581 aaPredicted RBP16.72■□□□□ 0.27
HPS1-202ENST00000338546 LRRC26Q2I0M4 334 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 SDHAF4Q5VUM1 108 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 KIAA1841Q6NSI8 718 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 C3orf62Q6ZUJ4 267 aa16.72■□□□□ 0.27
HPS1-202ENST00000338546 SLC39A11Q8N1S5 342 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms