RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 GABRR2P28476 465 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 TUBP50607 506 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 RING1Q06587 406 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 PAFAH1B3Q15102 231 aaKnown RBP15.16■□□□□ 0.02
CBX3-201ENST00000337620 KLHDC10Q6PID8 442 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 C14orf80Q86SX3 495 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 RBM23Q86U06 439 aaKnown RBP15.16■□□□□ 0.02
CBX3-201ENST00000337620 EIF1ADQ8N9N8 165 aaKnown RBP15.16■□□□□ 0.02
CBX3-201ENST00000337620 SNF8Q96H20 258 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 C1orf74Q96LT6 269 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 GDF15Q99988 308 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 IL21Q9HBE4 155 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 MAN1C1Q9NR34 630 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 MSRAQ9UJ68 235 aa15.16■□□□□ 0.02
CBX3-201ENST00000337620 E9PAM4 449 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 KCNN4O15554 427 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 RBL1P28749 1068 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 STIP1P31948 543 aaKnown RBP15.15■□□□□ 0.02
CBX3-201ENST00000337620 GPS1Q13098 491 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 MS4A13Q5J8X5 152 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 NUGGCQ68CJ6 796 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 EMBQ6PCB8 327 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 PDZD4Q76G19 769 aaPredicted RBP15.15■□□□□ 0.02
CBX3-201ENST00000337620 CCHCR1Q8TD31 782 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 ARNTL2Q8WYA1 636 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 TBC1D31Q96DN5 1066 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 CYP2S1Q96SQ9 504 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 CORO1BQ9BR76 489 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 GKN1Q9NS71 199 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 VANGL2Q9ULK5 521 aa15.15■□□□□ 0.02
CBX3-201ENST00000337620 CLASP2O75122 1294 aaKnown RBP15.14■□□□□ 0.01
CBX3-201ENST00000337620 RFPL2O75678 378 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 OAS1P00973 400 aaKnown RBP15.14■□□□□ 0.01
CBX3-201ENST00000337620 EPCAMP16422 314 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 IVDP26440 423 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 NRLP54845 237 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 COG7P83436 770 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 XRCC4Q13426 336 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 P3H1Q32P28 736 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 FAM182AQ5T1J6 154 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 PPP2R2DQ66LE6 453 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 RAP1GAP2Q684P5 730 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 TXNDC8Q6A555 127 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 PDE12Q6L8Q7 609 aaKnown RBP15.14■□□□□ 0.01
CBX3-201ENST00000337620 CDKL3Q8IVW4 592 aaPredicted RBP15.14■□□□□ 0.01
CBX3-201ENST00000337620 TP53INP2Q8IXH6 220 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 TNS4Q8IZW8 715 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 CCNYQ8ND76 341 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 FBXO25Q8TCJ0 367 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.14■□□□□ 0.017e-9■■■■■ 72.6
CBX3-201ENST00000337620 LGMNQ99538 433 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 PCDH9Q9HC56 1237 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 ZDHHC18Q9NUE0 388 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 WHRNQ9P202 907 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 CDH23Q9H251 3354 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 BCLAF3A2AJT9 711 aaKnown RBP15.14■□□□□ 0.01
CBX3-201ENST00000337620 H0YGN5 161 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 IRF1P10914 325 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 MYL4P12829 197 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 ITIH2P19823 946 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 HARS2P49590 506 aaKnown RBP15.14■□□□□ 0.01
CBX3-201ENST00000337620 CYP4F8P98187 520 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 AUHQ13825 339 aaKnown RBP15.14■□□□□ 0.01
CBX3-201ENST00000337620 SLC45A4Q5BKX6 768 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 MANEALQ5VSG8 457 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 ZDHHC24Q6UX98 284 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 LRRC31Q6UY01 552 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 GAREM2Q75VX8 874 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 TAB3Q8N5C8 712 aaPredicted RBP15.14■□□□□ 0.01
CBX3-201ENST00000337620 TFB1MQ8WVM0 346 aaKnown RBP15.14■□□□□ 0.01
CBX3-201ENST00000337620 OLFM3Q96PB7 478 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 FMO2Q99518 471 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 CATSPERBQ9H7T0 1116 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 USP29Q9HBJ7 922 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 SMPD4Q9NXE4 827 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 MPP6Q9NZW5 540 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 NEU3Q9UQ49 428 aa15.14■□□□□ 0.01
CBX3-201ENST00000337620 FGF10O15520 208 aaPredicted RBP15.13■□□□□ 0.01
CBX3-201ENST00000337620 MBL2P11226 248 aaPredicted RBP15.13■□□□□ 0.01
CBX3-201ENST00000337620 HTR7P34969 479 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 SERPINB6P35237 376 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 RPL22P35268 128 aaKnown RBP15.13■□□□□ 0.01
CBX3-201ENST00000337620 ITGA8P53708 1063 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 NRG1Q02297 640 aaPredicted RBP15.13■□□□□ 0.01
CBX3-201ENST00000337620 AP1B1Q10567 949 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 PDK1Q15118 436 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 IZUMO3Q5VZ72 239 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 TMC8Q8IU68 726 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 NPWQ8N729 165 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 ARL14EPQ8N8R7 260 aaPredicted RBP15.13■□□□□ 0.01
CBX3-201ENST00000337620 MRPS31Q92665 395 aaKnown RBP15.13■□□□□ 0.01
CBX3-201ENST00000337620 ART4Q93070 314 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 LRRC3Q9BY71 257 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 ATXN3LQ9H3M9 355 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 PRDM12Q9H4Q4 367 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 SLC28A3Q9HAS3 691 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 ASAH2Q9NR71 780 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 ANAPC5Q9UJX4 755 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 GOLGA6L7A0A1B0GV03 622 aa15.13■□□□□ 0.01
CBX3-201ENST00000337620 A0A1W2PRU2 124 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms