RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 MAD2L2Q9UI95 211 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 KCND3Q9UK17 655 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 SCAF8Q9UPN6 1271 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PPIL1Q9Y3C6 166 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 PHF3Q92576 2039 aaKnown RBP1.67□□□□□ -2.14
LINC00643-201ENST00000334389 EVPLQ92817 2033 aa1.67□□□□□ -2.14
LINC00643-201ENST00000334389 MEI4A8MW99 385 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 E9PLN8 166 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 LMO7DNF2Z398 122 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 STMND1H3BQB6 276 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 MATN2O00339 956 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ACKR2O00590 384 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 FOXP2O15409 715 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 DDX3YO15523 660 aaKnown RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ATP9BO43861 1147 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 AKR1B10O60218 316 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 PEX10O60683 326 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ZFPL1O95159 310 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 NDUFA7O95182 113 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 RAF1P04049 648 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 IGHV4-34P06331 123 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 IVLP07476 585 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 FAM157CP0CG43 387 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ITGA4P13612 1032 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 FPR1P21462 350 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 CYP7A1P22680 504 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ATICP31939 592 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 TCF7P36402 384 aaPredicted RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 SP2Q02086 613 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 PTH1RQ03431 593 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 NFATC2Q13469 925 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 SF3B4Q15427 424 aaKnown RBP eCLIP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 TRIP4Q15650 581 aaPredicted RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 CHRNA6Q15825 494 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 CCDC6Q16204 474 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ATP13A4Q4VNC1 1196 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 SEZ6Q53EL9 994 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 HES3Q5TGS1 186 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ARHGEF16Q5VV41 709 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 PDPK2PQ6A1A2 396 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 GDPD4Q6W3E5 623 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 MACC1Q6ZN28 852 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 DYMQ7RTS9 669 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 DEFB128Q7Z7B8 93 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 RHOT1Q8IXI2 618 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ELOA2Q8IYF1 753 aaPredicted RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 AMER3Q8N944 861 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 RASGEF1AQ8N9B8 481 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 RELL2Q8NC24 303 aaPredicted RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 IL31RAQ8NI17 732 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 PIP4K2CQ8TBX8 421 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ZDHHC1Q8WTX9 485 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 AUTS2Q8WXX7 1259 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ISL2Q96A47 359 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 JAKMIP2Q96AA8 810 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF512Q96ME7 567 aaPredicted RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 GPR137Q96N19 417 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ZNF285Q96NJ3 590 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 VKORC1Q9BQB6 163 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 LPIN3Q9BQK8 851 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 YIPF2Q9BWQ6 316 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 BRD8Q9H0E9 1235 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ING2Q9H160 280 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 BARX1Q9HBU1 254 aaPredicted RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 MOV10Q9HCE1 1003 aaKnown RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 LRRC4CQ9HCJ2 640 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 SRA1Q9HD15 236 aaKnown RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 GJB4Q9NTQ9 266 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ZMAT5Q9UDW3 170 aaKnown RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 PPIEQ9UNP9 301 aaKnown RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ANKRD6Q9Y2G4 727 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 PCDHA10Q9Y5I2 948 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 MRVI1Q9Y6F6 885 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 DOCK9Q9BZ29 2069 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 A0A096LNT2 108 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 RCCD1A6NED2 376 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 NEMP2A6NFY4 417 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 KPNA7A9QM74 516 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 D6RAR5 112 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 SMARCA5O60264 1052 aaPredicted RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 SRGAP2O75044 1071 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 TAF5LO75529 589 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 S1PR4O95977 384 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 EGFP01133 1207 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 CCDC192P0DO97 292 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ITGAXP20702 1163 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 GARTP22102 1010 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 GARSP41250 739 aaKnown RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ARRB1P49407 418 aaPredicted RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 STAT5BP51692 787 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 SMSP52788 366 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 BPIFB3P59826 476 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 NTHL1P78549 312 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 PPARAQ07869 468 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 LOXL1Q08397 574 aaPredicted RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 ADCY2Q08462 1091 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 CYP4F3Q08477 520 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 CHAF1AQ13111 956 aaPredicted RBP1.66□□□□□ -2.14
LINC00643-201ENST00000334389 MTF1Q14872 753 aa1.66□□□□□ -2.14
LINC00643-201ENST00000334389 NCAPHQ15003 741 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms