RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ASB3Q9Y575 518 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 DPYSL4O14531 572 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 MFSD11O43934 449 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 USP12O75317 370 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 STILQ15468 1287 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 ZNF618Q5T7W0 954 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 PACS1Q6VY07 963 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 TMEM110Q86TL2 294 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 COLGALT1Q8NBJ5 622 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 PIWIL2Q8TC59 973 aaKnown RBP12.68□□□□□ -0.38
VPS33B-201ENST00000333371 TBCBQ99426 244 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 MKS1Q9NXB0 559 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 TMEM216Q9P0N5 145 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 CCL15-CCL14A0A0B4J2E2 113 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 TPSB2P20231 275 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 LMO2P25791 158 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 WASHC5Q12768 1159 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 TPSAB1Q15661 275 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 DPYSL2Q16555 572 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 CCL15Q16663 113 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 RABGAP1LQ5R372 815 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 LPCAT4Q643R3 524 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 ARNTL2Q8WYA1 636 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 LRRC39Q96DD0 335 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 IFT43Q96FT9 208 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 QKIQ96PU8 341 aaKnown RBP eCLIP12.67□□□□□ -0.38
VPS33B-201ENST00000333371 TUBGCP5Q96RT8 1024 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 SORT1Q99523 831 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 FRMD8Q9BZ67 464 aaPredicted RBP12.67□□□□□ -0.38
VPS33B-201ENST00000333371 SPATS2LQ9NUQ6 558 aaKnown RBP12.67□□□□□ -0.38
VPS33B-201ENST00000333371 SYBUQ9NX95 663 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 NDE1Q9NXR1 346 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 SNTG2Q9NY99 539 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 TSPAN1O60635 241 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 PLIN3O60664 434 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 SIN3BO75182 1162 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 PROCP04070 461 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 LGALS2P05162 132 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 PSMB4P28070 264 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 RABGGTBP53611 331 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 TNFAIP2Q03169 654 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 ARHGAP1Q07960 439 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 CDC16Q13042 620 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 USP4Q13107 963 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 SEMA5AQ13591 1074 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 GPR162Q16538 588 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 TRMT5Q32P41 509 aaKnown RBP12.67□□□□□ -0.38
VPS33B-201ENST00000333371 ZNF484Q5JVG2 852 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 PHTF2Q8N3S3 785 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 HTR3CQ8WXA8 447 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 VCXQ9H320 206 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 ANGPTL2Q9UKU9 493 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 SOX13Q9UN79 622 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 SCN4AP35499 1836 aa12.67□□□□□ -0.38
VPS33B-201ENST00000333371 F8W8V4 182 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 BIRC5O15392 142 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 NCF2P19878 526 aaPredicted RBP12.66□□□□□ -0.38
VPS33B-201ENST00000333371 POLE2P56282 527 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 NIPAL4Q0D2K0 466 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 ITGA9Q13797 1035 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 TCHHL1Q5QJ38 904 aaPredicted RBP12.66□□□□□ -0.38
VPS33B-201ENST00000333371 WDR75Q8IWA0 830 aaKnown RBP12.66□□□□□ -0.38
VPS33B-201ENST00000333371 PLD6Q8N2A8 252 aaKnown RBP12.66□□□□□ -0.38
VPS33B-201ENST00000333371 PGBD4Q96DM1 585 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 PPP1R36Q96LQ0 422 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 AGAP3Q96P47 875 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 ECSITQ9BQ95 431 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 EBF3Q9H4W6 596 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 VTA1Q9NP79 307 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 PAPOLBQ9NRJ5 636 aaKnown RBP12.66□□□□□ -0.38
VPS33B-201ENST00000333371 ITGA2BP08514 1039 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 IDH3AP50213 366 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 SERPINB9P50453 376 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 AP2B1P63010 937 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 HIC1Q14526 733 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 DLG2Q15700 870 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 ZNF792Q3KQV3 632 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 DNAL1Q4LDG9 190 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 C6orf163Q5TEZ5 329 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 ISLR2Q6UXK2 745 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 DPP9Q86TI2 863 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 SESTD1Q86VW0 696 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 SLC26A7Q8TE54 656 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 AFG1LQ8WV93 481 aa12.66□□□□□ -0.38
VPS33B-201ENST00000333371 TFB1MQ8WVM0 346 aaKnown RBP12.66□□□□□ -0.38
VPS33B-201ENST00000333371 ZSWIM8A7E2V4 1837 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 BTBD19C9JJ37 291 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 KCNK1O00180 336 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 RNF103O00237 685 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 BUD23O43709 281 aaKnown RBP12.65□□□□□ -0.38
VPS33B-201ENST00000333371 RNASEH1O60930 286 aaKnown RBP12.65□□□□□ -0.38
VPS33B-201ENST00000333371 LYNP07948 512 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 AOC1P19801 751 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 ADCYAP1R1P41586 468 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 DSG1Q02413 1049 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 KIZQ2M2Z5 673 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 ARCQ7LC44 396 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 CCNYQ8ND76 341 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 P2RY11Q96G91 374 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms