RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 LHX1P48742 406 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 CPT1AP50416 773 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 PPIDQ08752 370 aaKnown RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 STX3Q13277 289 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 BMPR2Q13873 1038 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 CHI3L2Q15782 390 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 RAB41Q5JT25 222 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 GRTP1Q5TC63 336 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 CLEC20AQ6ZU45 233 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 DENND5BQ6ZUT9 1274 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 RFX8Q6ZV50 586 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 PAQR9Q6ZVX9 377 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 FAM131BQ86XD5 332 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 TMPRSS6Q8IU80 811 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 SIX6OS1Q8N1H7 587 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 SMG8Q8ND04 991 aaKnown RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 STON2Q8WXE9 905 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 UGT1A7Q9HAW7 530 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 UGT1A10Q9HAW8 530 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 UGT1A8Q9HAW9 530 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 ALG13Q9NP73 1137 aaKnown RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 PCMTD2Q9NV79 361 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 STOML1Q9UBI4 398 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 WDR27A2RRH5 827 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 GLTPD2A6NH11 291 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 EEF2KO00418 725 aaKnown RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 GYG2O15488 501 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 HCRTO43612 131 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 PLIN3O60664 434 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 MAP3K6O95382 1288 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 AP2A1O95782 977 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 F9P00740 461 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 ALDOAP04075 364 aaKnown RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 RPLP2P05387 115 aaKnown RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 FAM200BP0CF97 657 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 AKAP5P24588 427 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 DNAJB1P25685 340 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 ADRA1BP35368 520 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 GP5P40197 560 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 CDK7P50613 346 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 DAOAP59103 153 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 DEUP1Q05D60 604 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 TMEM62Q0P6H9 643 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 MAP2K5Q13163 448 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 DNAL1Q4LDG9 190 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 DCAF6Q58WW2 860 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 SYCP2LQ5T4T6 812 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 MROH9Q5TGP6 573 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 ARMC3Q5W041 872 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 MBLAC2Q68D91 279 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 TAF2Q6P1X5 1199 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 BEND5Q7L4P6 421 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 TLK2Q86UE8 772 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 LCA5Q86VQ0 697 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 ZNF567Q8N184 647 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 PYROXD2Q8N2H3 581 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 TEX9Q8N6V9 391 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 PDCD7Q8N8D1 485 aaKnown RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 SMC1BQ8NDV3 1235 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 TMEM40Q8WWA1 233 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 DNAJB3Q8WWF6 145 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 IRGQQ8WZA9 623 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 FAM149B1Q96BN6 582 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 HDAC11Q96DB2 347 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 ZNF570Q96NI8 536 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 LPIN3Q9BQK8 851 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 NMUR2Q9GZQ4 415 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 PRDM12Q9H4Q4 367 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 LRRC40Q9H9A6 602 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 FBXO6Q9NRD1 293 aaPredicted RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 TAS2R1Q9NYW7 299 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 TRHDEQ9UKU6 1024 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 SHROOM3Q8TF72 1996 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 TDRD15B5MCY1 1934 aaKnown RBP11.04□□□□□ -0.64
CCDC172-201ENST00000333254 NLRC5Q86WI3 1866 aa11.04□□□□□ -0.64
CCDC172-201ENST00000333254 FAM237BA0A1B0GVD1 139 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 MAGEB16A2A368 324 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 M0QYT0 321 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 CYB561D2O14569 222 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 PTGESO14684 152 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 DYNC1LI2O43237 492 aaPredicted RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 USP1O94782 785 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 IGHA2P01877 340 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 SERPINE1P05121 402 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 ITGA2BP08514 1039 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 ZNF865P0CJ78 1059 aaPredicted RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 AOC1P19801 751 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 MX2P20592 715 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 CYP2C18P33260 490 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 HADHAP40939 763 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 GRIA1P42261 906 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 CLNS1AP54105 237 aaKnown RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 CSE1LP55060 971 aaKnown RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 IFRD2Q12894 506 aaPredicted RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 CCDC153Q494R4 210 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 HSF5Q4G112 596 aaPredicted RBP11.03□□□□□ -0.64
CCDC172-201ENST00000333254 ZNF618Q5T7W0 954 aa11.03□□□□□ -0.64
CCDC172-201ENST00000333254 OLFML2BQ68BL8 750 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms