RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 GP5P40197 560 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 MED21Q13503 144 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 SPDYE7PQ495Y7 208 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 PTPN20Q4JDL3 420 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 CAPRIN2Q6IMN6 1127 aaKnown RBP13.32□□□□□ -0.28
VSTM4-202ENST00000332853 ZC3H15Q8WU90 426 aaKnown RBP13.32□□□□□ -0.28
VSTM4-202ENST00000332853 LGMNQ99538 433 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 ATP13A1Q9HD20 1204 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 HMX1Q9NP08 348 aaPredicted RBP13.32□□□□□ -0.28
VSTM4-202ENST00000332853 SLC25A13Q9UJS0 675 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 A0A096LPK6 155 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 HACD1B0YJ81 288 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 AP1ARQ63HQ0 302 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 NUDT18Q6ZVK8 323 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 C11orf96Q7Z7L8 435 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 SCUBE1Q8IWY4 988 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 CLEC4FQ8N1N0 589 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 MTMR14Q8NCE2 650 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 CPXM1Q96SM3 734 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 UBXN6Q9BZV1 441 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 SENP6Q9GZR1 1112 aaPredicted RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 MYLK2Q9H1R3 596 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 MTIF3Q9H2K0 278 aaKnown RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 RIC8BQ9NVN3 520 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 ZNF212Q9UDV6 495 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 SLC27A5Q9Y2P5 690 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 H2AFYO75367 372 aaKnown RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 GRM5P41594 1212 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 LRRC74AQ0VAA2 488 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 ZNF333Q96JL9 665 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 RRN3Q9NYV6 651 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 ARHGAP28Q9P2N2 729 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 R3HDM2Q9Y2K5 976 aaKnown RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 CFAP99D6REC4 459 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 CD151P48509 253 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 SKOR1P84550 965 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 NBPF20Q3BBV1 942 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 C9orf57Q5W0N0 161 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 CPNE1Q99829 537 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 BRD8Q9H0E9 1235 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 STX18Q9P2W9 335 aaKnown RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 LRRC37A3O60309 1634 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 LCA5LO95447 670 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 GUCA1CO95843 209 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 MPOP05164 745 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 PLK1P53350 603 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 USP13Q92995 863 aaPredicted RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 CRYL1Q9Y2S2 319 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 TRDMT1O14717 391 aaKnown RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 PHGDHO43175 533 aaKnown RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 PLOD1Q02809 727 aaPredicted RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 RAP1GAP2Q684P5 730 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 SUGP1Q8IWZ8 645 aaKnown RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 PIF1Q9H611 641 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 ABCC13Q9NSE7 274 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 GID8Q9NWU2 228 aa13.31□□□□□ -0.28
VSTM4-202ENST00000332853 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.31□□□□□ -0.28
VSTM4-202ENST00000332853 BUD23O43709 281 aaKnown RBP13.3□□□□□ -0.28
VSTM4-202ENST00000332853 CBX6O95503 412 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 ITGAVP06756 1048 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 CALB2P22676 271 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 BRCC3P46736 316 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 CRYBB1P53674 252 aaPredicted RBP13.3□□□□□ -0.28
VSTM4-202ENST00000332853 CYLC2Q14093 348 aaPredicted RBP13.3□□□□□ -0.28
VSTM4-202ENST00000332853 TSHZ1Q6ZSZ6 1077 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 CAMKK2Q96RR4 588 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 TAGLN3Q9UI15 199 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 MAGEB16A2A368 324 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 NR5A2O00482 541 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 FSCN2O14926 492 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 TREHO43280 583 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 RENBPP51606 427 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 BTG3Q14201 252 aaPredicted RBP13.3□□□□□ -0.28
VSTM4-202ENST00000332853 LENG9Q96B70 501 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 ADGRE3Q9BY15 652 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 CIPCQ9C0C6 399 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 CLPBQ9H078 707 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 TRHDEQ9UKU6 1024 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 CHADO15335 359 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 SERPINB3P29508 390 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 LRRC38Q5VT99 294 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 POU5F2Q8N7G0 328 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 CATSPER1Q8NEC5 780 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 ATXN2LQ8WWM7 1075 aaKnown RBP13.3□□□□□ -0.28
VSTM4-202ENST00000332853 PKD2L2Q9NZM6 624 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 GPR25O00155 361 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 FKBP9O95302 570 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 SERPINF2P08697 491 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.3□□□□□ -0.28
VSTM4-202ENST00000332853 FKBP9P1Q75LS8 142 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 RAB42Q8N4Z0 105 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 CNBD2Q96M20 576 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 EIF2AQ9BY44 585 aaKnown RBP13.3□□□□□ -0.28
VSTM4-202ENST00000332853 NIFKQ9BYG3 293 aaKnown RBP13.3□□□□□ -0.28
VSTM4-202ENST00000332853 VPS9D1Q9Y2B5 631 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 NUP188Q5SRE5 1749 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 A0A0A0MRY4 1105 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 PARP6Q2NL67 630 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 SETD3Q86TU7 594 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms