RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ZNF567Q8N184 647 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 STAMBPL1Q96FJ0 436 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 ZIC5Q96T25 663 aa17.91■□□□□ 0.46
DDX28-201ENST00000332395 ALG13Q9NP73 1137 aaKnown RBP17.91■□□□□ 0.46
DDX28-201ENST00000332395 A0A0U1RQF3 1178 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 CFAP73A6NFT4 308 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 COPEO14579 308 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 KRT38O76015 456 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 PSMB4P28070 264 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 BRCC3P46736 316 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 TPI1P60174 286 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 CACNB2Q08289 660 aaPredicted RBP17.9■□□□□ 0.46
DDX28-201ENST00000332395 KCNA10Q16322 511 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 PARP6Q2NL67 630 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 CHSY1Q86X52 802 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 CEP57Q86XR8 500 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 C10orf82Q8WW14 230 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 EDEM1Q92611 657 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 APBB2Q92870 758 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 PTPRN2Q92932 1015 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 MIEF2Q96C03 454 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 SRPK1Q96SB4 655 aaKnown RBP17.9■□□□□ 0.46
DDX28-201ENST00000332395 ACBD6Q9BR61 282 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 COLEC11Q9BWP8 271 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 RRN3Q9NYV6 651 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 MOCS1Q9NZB8 636 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 WDR27A2RRH5 827 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 MGRN1O60291 552 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 PRKCZQ05513 592 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 BMPR2Q13873 1038 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 DSC3Q14574 896 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 LPIN1Q14693 890 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 ARL13BQ3SXY8 428 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 FYB2Q5VWT5 728 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 STEAP4Q687X5 459 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 CASC4Q6P4E1 433 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 FAM171BQ6P995 826 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 PDZD4Q76G19 769 aaPredicted RBP17.9■□□□□ 0.46
DDX28-201ENST00000332395 TBC1D1Q86TI0 1168 aaPredicted RBP17.9■□□□□ 0.46
DDX28-201ENST00000332395 METTL23Q86XA0 190 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 MTBPQ96DY7 904 aa17.9■□□□□ 0.46
DDX28-201ENST00000332395 OXNAD1Q96HP4 312 aaPredicted RBP17.9■□□□□ 0.46
DDX28-201ENST00000332395 IQCGQ9H095 443 aaKnown RBP17.9■□□□□ 0.46
DDX28-201ENST00000332395 TDRD15B5MCY1 1934 aaKnown RBP17.89■□□□□ 0.45
DDX28-201ENST00000332395 SDR42E2A6NKP2 422 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 RFPL1O75677 317 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 CYP11A1P05108 521 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 EZRP15311 586 aaKnown RBP17.89■□□□□ 0.45
DDX28-201ENST00000332395 BDNFP23560 247 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 SLC8A1P32418 973 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 TM4SF4P48230 202 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 HCAR3P49019 387 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 CRADDP78560 199 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 GRIK3Q13003 919 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 SETDB1Q15047 1291 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 INTS6LQ5JSJ4 861 aaKnown RBP17.89■□□□□ 0.45
DDX28-201ENST00000332395 CDHR3Q6ZTQ4 885 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 CYS1Q717R9 158 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 HASPINQ8TF76 798 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 DEPDC1BQ8WUY9 529 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 TTC17Q96AE7 1141 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 ADAM2Q99965 735 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 PIH1D1Q9NWS0 290 aaKnown RBP17.89■□□□□ 0.45
DDX28-201ENST00000332395 CHKBQ9Y259 395 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 INPP5FQ9Y2H2 1132 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 KCNK1O00180 336 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 F9P00740 461 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 ALDH3A1P30838 453 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 CCNFP41002 786 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 SESN2P58004 480 aaPredicted RBP17.89■□□□□ 0.45
DDX28-201ENST00000332395 ELF3P78545 371 aaPredicted RBP17.89■□□□□ 0.45
DDX28-201ENST00000332395 IFRD2Q12894 506 aaPredicted RBP17.89■□□□□ 0.45
DDX28-201ENST00000332395 CD300LGQ6UXG3 332 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 KLHDC9Q8NEP7 349 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 IRGQQ8WZA9 623 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 ERP27Q96DN0 273 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 LRRC37BQ96QE4 947 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 MYLK2Q9H1R3 596 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 NPHS2Q9NP85 383 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 IGSF9Q9P2J2 1179 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 RAD54BQ9Y620 910 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 TLL2Q9Y6L7 1015 aa17.89■□□□□ 0.45
DDX28-201ENST00000332395 DCTN3O75935 186 aa17.88■□□□□ 0.45
DDX28-201ENST00000332395 ALDH1A2O94788 518 aa17.88■□□□□ 0.45
DDX28-201ENST00000332395 MGAT1P26572 445 aa17.88■□□□□ 0.45
DDX28-201ENST00000332395 CCND3P30281 292 aaPredicted RBP17.88■□□□□ 0.45
DDX28-201ENST00000332395 SERPINB4P48594 390 aa17.88■□□□□ 0.45
DDX28-201ENST00000332395 PM20D1Q6GTS8 502 aa17.88■□□□□ 0.45
DDX28-201ENST00000332395 PID1Q7Z2X4 250 aa17.88■□□□□ 0.45
DDX28-201ENST00000332395 NPWQ8N729 165 aa17.88■□□□□ 0.45
DDX28-201ENST00000332395 PGBD4Q96DM1 585 aa17.88■□□□□ 0.45
DDX28-201ENST00000332395 WDCPQ9H6R7 721 aa17.88■□□□□ 0.45
DDX28-201ENST00000332395 DMAP1Q9NPF5 467 aaPredicted RBP17.88■□□□□ 0.45
DDX28-201ENST00000332395 TMLHEQ9NVH6 421 aa17.88■□□□□ 0.45
DDX28-201ENST00000332395 HMX2A2RU54 273 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 M0QZQ0 153 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 TROVE2P10155 538 aaKnown RBP eCLIP17.87■□□□□ 0.45
DDX28-201ENST00000332395 CCNB1P14635 433 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 CXCR3P49682 368 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 SERPINB9P50453 376 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms