RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CNGB3Q9NQW8 809 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 MTMR11A4FU01 709 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 F7P08709 466 aaPredicted RBP16.36■□□□□ 0.21
PDGFB-201ENST00000331163 HARS2P49590 506 aaKnown RBP16.36■□□□□ 0.21
PDGFB-201ENST00000331163 EPHB3P54753 998 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 BIRC2Q13490 618 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 OLIG2Q13516 323 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 ZKSCAN8Q15776 578 aaPredicted RBP16.36■□□□□ 0.21
PDGFB-201ENST00000331163 SLC26A9Q7LBE3 791 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 KATNAL2Q8IYT4 538 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 LGI2Q8N0V4 545 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 ANKS4BQ8N8V4 417 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 IPMKQ8NFU5 416 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 MUC3BQ9H195 1237 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 PRDM12Q9H4Q4 367 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 A8MX80 341 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 GOLGA8TH3BQL2 631 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 PAGE1O75459 146 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 SLC29A2Q14542 456 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 SLC25A52Q3SY17 297 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 CARNMT1Q8N4J0 409 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 DDI1Q8WTU0 396 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 KLHL5Q96PQ7 755 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 KCTD15Q96SI1 283 aaPredicted RBP16.36■□□□□ 0.21
PDGFB-201ENST00000331163 RTP3Q9BQQ7 232 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 UBE2OQ9C0C9 1292 aaKnown RBP16.36■□□□□ 0.21
PDGFB-201ENST00000331163 SP110Q9HB58 689 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 TXNDC16Q9P2K2 825 aa16.36■□□□□ 0.21
PDGFB-201ENST00000331163 CBX4O00257 560 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 ADRA1BP35368 520 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 CDKN2BP42772 138 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 GPNMBQ14956 572 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 TMED2Q15363 201 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 ANO4Q32M45 955 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 ZNF662Q6ZS27 426 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 PDZD4Q76G19 769 aaPredicted RBP16.35■□□□□ 0.21
PDGFB-201ENST00000331163 PRCCQ92733 491 aaPredicted RBP16.35■□□□□ 0.21
PDGFB-201ENST00000331163 FAM136AQ96C01 138 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 SLC28A3Q9HAS3 691 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 IL1RAPL1Q9NZN1 696 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 SAMD15Q9P1V8 674 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 CNTN6Q9UQ52 1028 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 NEU2Q9Y3R4 380 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 ABHD14A-ACY1A0A1B0GW23 586 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 BUD23O43709 281 aaKnown RBP16.35■□□□□ 0.21
PDGFB-201ENST00000331163 GAD2Q05329 585 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 NAT16Q8N8M0 369 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 PCDH19Q8TAB3 1148 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 SNF8Q96H20 258 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 RNF157Q96PX1 679 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 BTNL10A8MVZ5 291 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 TEX28O15482 410 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 DIAPH2O60879 1101 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 CAND2O75155 1236 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 FBXO21O94952 628 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 HOXC8P31273 242 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 SMAD3P84022 425 aaKnown RBP16.35■□□□□ 0.21
PDGFB-201ENST00000331163 PPIGQ13427 754 aaKnown RBP eCLIP16.35■□□□□ 0.219e-9■■■■■ 34
PDGFB-201ENST00000331163 PDIK1LQ8N165 341 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 OLIG1Q8TAK6 271 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 POF1BQ8WVV4 589 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 FBXO44Q9H4M3 255 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 TBX21Q9UL17 535 aa16.35■□□□□ 0.21
PDGFB-201ENST00000331163 RGS16O15492 202 aaPredicted RBP16.34■□□□□ 0.21
PDGFB-201ENST00000331163 LRIG2O94898 1065 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 OR1E1P30953 314 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 SLC8A1P32418 973 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 DPYSL3Q14195 570 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 ATPAF2Q8N5M1 289 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 UBR7Q8N806 425 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 NUP205Q92621 2012 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 MRPS31Q92665 395 aaKnown RBP16.34■□□□□ 0.21
PDGFB-201ENST00000331163 TOP1MTQ969P6 601 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 CSPG4P5Q96PW8 444 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 YIPF3Q9GZM5 350 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 GJB5O95377 273 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 CHN1P15882 459 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 AVPR1AP37288 418 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 NTHL1P78549 312 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 PDCD7Q8N8D1 485 aaKnown RBP16.34■□□□□ 0.21
PDGFB-201ENST00000331163 OR6K2Q8NGY2 324 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 HTATIP2Q9BUP3 242 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 ABCC13Q9NSE7 274 aa16.34■□□□□ 0.21
PDGFB-201ENST00000331163 WDR91A4D1P6 747 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 MFSD11O43934 449 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 C8AP07357 584 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 PIRTP0C851 137 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 CHKAP35790 457 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 ABCG1P45844 678 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 PMS2P54278 862 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 LMNB2Q03252 620 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 PPP2R5EQ16537 467 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 POM121L1PQ3SYA9 428 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 C9orf50Q5SZB4 431 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 TTC13Q8NBP0 860 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 SH3BP1Q9Y3L3 701 aa16.33■□□□□ 0.21
PDGFB-201ENST00000331163 GABRDO14764 452 aa16.33■□□□□ 0.2
PDGFB-201ENST00000331163 ATP6V1G2O95670 118 aa16.33■□□□□ 0.2
PDGFB-201ENST00000331163 TUFMP49411 452 aaKnown RBP16.33■□□□□ 0.2
PDGFB-201ENST00000331163 PPM1LQ5SGD2 360 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms