RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 PRR5-ARHGAP8B1AHC4 643 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 ANPEPP15144 967 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 CPOXP36551 454 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 ARHGAP8P85298 464 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 FRG1Q14331 258 aaKnown RBP20.44■□□□□ 0.86
SOX2-201ENST00000325404 EFHC1Q5JVL4 640 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 OR6J1Q8NGC5 347 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 SNX27Q96L92 541 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 PANX3Q96QZ0 392 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 SLC7A8Q9UHI5 535 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 SCOCQ9UIL1 159 aa20.44■□□□□ 0.86
SOX2-201ENST00000325404 KITP10721 976 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 VAV1P15498 845 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 SLC1A6P48664 564 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 ALDH18A1P54886 795 aaKnown RBP20.43■□□□□ 0.86
SOX2-201ENST00000325404 KDSRQ06136 332 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 PDE1CQ14123 709 aaPredicted RBP20.43■□□□□ 0.86
SOX2-201ENST00000325404 RCN2Q14257 317 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 N4BP2L1Q5TBK1 243 aaPredicted RBP20.43■□□□□ 0.86
SOX2-201ENST00000325404 FBXO27Q8NI29 283 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 DTX3LQ8TDB6 740 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 ISL2Q96A47 359 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 TRPM7Q96QT4 1865 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 TRIM56Q9BRZ2 755 aaKnown RBP20.43■□□□□ 0.86
SOX2-201ENST00000325404 FZD10Q9ULW2 581 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 APOBEC2Q9Y235 224 aaKnown RBP20.43■□□□□ 0.86
SOX2-201ENST00000325404 ASB3Q9Y575 518 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 ZNF236Q9UL36 1845 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 MAGEA13PA6NCF6 341 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 H3BRB1 525 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 SP100P23497 879 aaPredicted RBP20.43■□□□□ 0.86
SOX2-201ENST00000325404 MAP2K5Q13163 448 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 MORN1Q5T089 497 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 RGMBQ6NW40 437 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 DENND5BQ6ZUT9 1274 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 COLGALT1Q8NBJ5 622 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 ARNTL2Q8WYA1 636 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 GATA6Q92908 595 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 THTPAQ9BU02 230 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 TUT1Q9H6E5 874 aaKnown RBP20.43■□□□□ 0.86
SOX2-201ENST00000325404 MARCOQ9UEW3 520 aaPredicted RBP20.43■□□□□ 0.86
SOX2-201ENST00000325404 ADAM28Q9UKQ2 775 aa20.43■□□□□ 0.86
SOX2-201ENST00000325404 MMP3P08254 477 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 SOWAHAQ2M3V2 549 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 SAPCD2Q86UD0 394 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 CCDC185Q8N715 623 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 OR6B3Q8NGW1 331 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 ZNF778Q96MU6 729 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 DNAJC16Q9Y2G8 782 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 MATKP42679 507 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 CDK7P50613 346 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 CCNHP51946 323 aaPredicted RBP20.42■□□□□ 0.86
SOX2-201ENST00000325404 MXRA7P84157 204 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 PCBP1Q15365 356 aaKnown RBP eCLIP20.42■□□□□ 0.86
SOX2-201ENST00000325404 PPP4R1Q8TF05 950 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 TSPAN18Q96SJ8 248 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 EBF4Q9BQW3 602 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 CCDC28BQ9BUN5 200 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 IGSF9Q9P2J2 1179 aa20.42■□□□□ 0.86
SOX2-201ENST00000325404 TPP1O14773 563 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 PROCP04070 461 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 FESP07332 822 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 ITGA2BP08514 1039 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 HOXD8P13378 290 aaPredicted RBP20.41■□□□□ 0.86
SOX2-201ENST00000325404 HARS2P49590 506 aaKnown RBP20.41■□□□□ 0.86
SOX2-201ENST00000325404 CDC42EP1Q00587 391 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 PCLAFQ15004 111 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 PDK1Q15118 436 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 DGKDQ16760 1214 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 SLC25A52Q3SY17 297 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 SPANXN3Q5MJ09 141 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 FAM182AQ5T1J6 154 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 OR52E8Q6IFG1 317 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 LRRN4Q8WUT4 740 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 ZMAT2Q96NC0 199 aaKnown RBP20.41■□□□□ 0.86
SOX2-201ENST00000325404 PPP1R16BQ96T49 567 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 A0A088AWK7 358 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 CCNT2O60583 730 aaKnown RBP20.41■□□□□ 0.86
SOX2-201ENST00000325404 GOT1P17174 413 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 CRABP2P29373 138 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 GARSP41250 739 aaKnown RBP20.41■□□□□ 0.86
SOX2-201ENST00000325404 MAGEA12P43365 314 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 CCDC153Q494R4 210 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 GRTP1Q5TC63 336 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 SLC27A1Q6PCB7 646 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 ALKAL1Q6UXT8 129 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 ZCCHC23Q6ZST2 131 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 OR6Y1Q8NGX8 325 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 NDE1Q9NXR1 346 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 WASF2Q9Y6W5 498 aa20.41■□□□□ 0.86
SOX2-201ENST00000325404 PPEF2O14830 753 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 AHCYL1O43865 530 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 ATXN1P54253 815 aaKnown RBP20.4■□□□□ 0.86
SOX2-201ENST00000325404 HIC1Q14526 733 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 C1orf146Q5VVC0 180 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 C9orf57Q5W0N0 161 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 CASC4Q6P4E1 433 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 BNIPLQ7Z465 357 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 LIMS2Q7Z4I7 341 aa20.4■□□□□ 0.86
SOX2-201ENST00000325404 CLEC4CQ8WTT0 213 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms