RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PRDM16Q9HAZ2 1276 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 NUP98P52948 1817 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 NWD2Q9ULI1 1742 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 UBDO15205 165 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 LYPLA1O75608 230 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-201ENST00000323668 ABCG1P45844 678 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 ARHGDIAP52565 204 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 MRPS22P82650 360 aaKnown RBP15.09■□□□□ 0.01
TCOF1-201ENST00000323668 SNAPC2Q13487 334 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 CSHL1Q14406 222 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 UNC93AQ86WB7 457 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 OR52K1Q8NGK4 314 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 SH3TC2Q8TF17 1288 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 ULK4Q96C45 1275 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 OPTNQ96CV9 577 aa15.09■□□□□ 0.01
TCOF1-201ENST00000323668 HBS1LQ9Y450 684 aaKnown RBP15.09■□□□□ 0.01
TCOF1-201ENST00000323668 ZMPSTE24O75844 475 aa15.08■□□□□ 0.01
TCOF1-201ENST00000323668 TMEM63AO94886 807 aa15.08■□□□□ 0.01
TCOF1-201ENST00000323668 RBP1P09455 135 aa15.08■□□□□ 0.01
TCOF1-201ENST00000323668 COX4I1P13073 169 aa15.08■□□□□ 0.01
TCOF1-201ENST00000323668 SOX11P35716 441 aa15.08■□□□□ 0.01
TCOF1-201ENST00000323668 RPL14P50914 215 aaKnown RBP15.08■□□□□ 0.01
TCOF1-201ENST00000323668 POU6F1Q14863 301 aa15.08■□□□□ 0.01
TCOF1-201ENST00000323668 AASDHQ4L235 1098 aaPredicted RBP15.08■□□□□ 0.01
TCOF1-201ENST00000323668 APBA2Q99767 749 aa15.08■□□□□ 0.01
TCOF1-201ENST00000323668 BRD8Q9H0E9 1235 aa15.08■□□□□ 0.01
TCOF1-201ENST00000323668 ZNF180Q9UJW8 692 aa15.08■□□□□ 0.01
TCOF1-201ENST00000323668 PKD1L3Q7Z443 1732 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 GOLGA8TH3BQL2 631 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 MAP4P27816 1152 aaKnown RBP15.08■□□□□ 0
TCOF1-201ENST00000323668 CELF3Q5SZQ8 465 aaKnown RBP15.08■□□□□ 0
TCOF1-201ENST00000323668 SLC27A1Q6PCB7 646 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 RINLQ6ZS11 566 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 ZNF786Q8N393 782 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 LGMNQ99538 433 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 OSMRQ99650 979 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 NIFKQ9BYG3 293 aaKnown RBP15.08■□□□□ 0
TCOF1-201ENST00000323668 PRDM12Q9H4Q4 367 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 SUPT3HO75486 399 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 GJB1P08034 283 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 RHBDF2Q6PJF5 856 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 PACS1Q6VY07 963 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 SERAC1Q96JX3 654 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 UNKQ9C0B0 810 aaKnown RBP15.08■□□□□ 0
TCOF1-201ENST00000323668 AAASQ9NRG9 546 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 MORF4L1Q9UBU8 362 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 ALS2Q96Q42 1657 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 MYH13Q9UKX3 1938 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 PEX11AO75192 247 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 CCDC130P13994 396 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 TCF4P15884 667 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 PKNOX1P55347 436 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 RBBP7Q16576 425 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 IMPG1Q17R60 797 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 SLC39A4Q6P5W5 647 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 MARK2Q7KZI7 788 aaKnown RBP15.08■□□□□ 0
TCOF1-201ENST00000323668 RIOX2Q8IUF8 465 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 PSTKQ8IV42 348 aaKnown RBP15.08■□□□□ 0
TCOF1-201ENST00000323668 L3MBTL3Q96JM7 780 aaPredicted RBP15.08■□□□□ 0
TCOF1-201ENST00000323668 HSFY1Q96LI6 401 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 MAN1C1Q9NR34 630 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 BTBD7Q9P203 1132 aa15.08■□□□□ 0
TCOF1-201ENST00000323668 KDM4FA0A1W2PPD8 638 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 ERI2A8K979 691 aaKnown RBP15.07■□□□□ 0
TCOF1-201ENST00000323668 NDUFS3O75489 264 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 ZNF286BP0CG31 522 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 SPRED3Q2MJR0 410 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 TXNRD3NBQ6F5E7 133 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 PLPPR4Q7Z2D5 763 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 RELL1Q8IUW5 271 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 NAT8LQ8N9F0 302 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 TUBGCP3Q96CW5 907 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 CELF6Q96J87 481 aaKnown RBP15.07■□□□□ 0
TCOF1-201ENST00000323668 CLPTM1LQ96KA5 538 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 ADNPQ9H2P0 1102 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 COPS7BQ9H9Q2 264 aaPredicted RBP15.07■□□□□ 0
TCOF1-201ENST00000323668 TBC1D23Q9NUY8 699 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 HEATR9A2RTY3 570 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 EDIL3O43854 480 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 FARP2O94887 1054 aaPredicted RBP15.07■□□□□ 0
TCOF1-201ENST00000323668 VAPBO95292 243 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 PSMA4P25789 261 aaKnown RBP15.07■□□□□ 0
TCOF1-201ENST00000323668 ALDH1A3P47895 512 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 KCNK10P57789 538 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 LBRQ14739 615 aaKnown RBP15.07■□□□□ 0
TCOF1-201ENST00000323668 C6orf10Q5SRN2 563 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 CLEC4FQ8N1N0 589 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 URGCPQ8TCY9 931 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 ZFRQ96KR1 1074 aaKnown RBP15.07■□□□□ 0
TCOF1-201ENST00000323668 FICDQ9BVA6 458 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 ADAM7Q9H2U9 754 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 GPAMQ9HCL2 828 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 LNPEPQ9UIQ6 1025 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 MAFBQ9Y5Q3 323 aaPredicted RBP15.07■□□□□ 0
TCOF1-201ENST00000323668 PHGDHO43175 533 aaKnown RBP15.07■□□□□ 0
TCOF1-201ENST00000323668 CILPO75339 1184 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 CETPP11597 493 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 CD151P48509 253 aa15.07■□□□□ 0
TCOF1-201ENST00000323668 SPOUT1Q5T280 376 aaKnown RBP15.07■□□□□ 0
TCOF1-201ENST00000323668 SCARA3Q6AZY7 606 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms