RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 PPP2R2AP63151 447 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 CAV1Q03135 178 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 SLC45A4Q5BKX6 768 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 VPS52Q8N1B4 723 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 MPP5Q8N3R9 675 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 CCHCR1Q8TD31 782 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 DYDC1Q8WWB3 177 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 TTPALQ9BTX7 342 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 C12orf65Q9H3J6 166 aaKnown RBP9.39□□□□□ -0.91
CD46-202ENST00000322918 PITPNM1O00562 1244 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 NUDT17P0C025 328 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 RAG1P15918 1043 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 TYMPP19971 482 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 PSMB4P28070 264 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 BIRC2Q13490 618 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 TAF12Q16514 161 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 UNC5BQ8IZJ1 945 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 NUP93Q8N1F7 819 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 NAT8LQ8N9F0 302 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 COLGALT1Q8NBJ5 622 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 FBF1Q8TES7 1133 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 FCRL2Q96LA5 508 aaPredicted RBP9.39□□□□□ -0.91
CD46-202ENST00000322918 WDR83Q9BRX9 315 aaKnown RBP9.39□□□□□ -0.91
CD46-202ENST00000322918 KLC2Q9H0B6 622 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 ZCWPW1Q9H0M4 648 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 CCSER2Q9H7U1 834 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 CYLDQ9NQC7 956 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 ZNF638Q14966 1978 aaKnown RBP9.39□□□□□ -0.91
CD46-202ENST00000322918 FAM155BO75949 473 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 OAZ2O95190 189 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 IRF1P10914 325 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 CHN1P15882 459 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 MNX1P50219 401 aaPredicted RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 GPX6P59796 221 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 BTG3Q14201 252 aaPredicted RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 ANKRD20A2Q5SQ80 823 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 C6orf118Q5T5N4 469 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 ANKRD20A1Q5TYW2 823 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 ANKRD20A3Q5VUR7 823 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 C14orf80Q86SX3 495 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 CDKL3Q8IVW4 592 aaPredicted RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 KIRREL3Q8IZU9 778 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 NT5C3BQ969T7 300 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 ZNF512Q96ME7 567 aaPredicted RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 SAGE1Q9NXZ1 904 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 SLC17A6Q9P2U8 582 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 MTMR11A4FU01 709 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 RASA4BC9J798 803 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 TNFRSF10BO14763 440 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 RASA4O43374 803 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 JCHAINP01591 159 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 NFE2Q16621 373 aaPredicted RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 RASIP1Q5U651 963 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 FBXO22Q8NEZ5 403 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 SERPINB12Q96P63 405 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 EPAS1Q99814 870 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 CCDC77Q9BR77 488 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 TACO1Q9BSH4 297 aaKnown RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 ATXN3LQ9H3M9 355 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 CYP4F11Q9HBI6 524 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 ABCC13Q9NSE7 274 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 SMPD4Q9NXE4 827 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 PAK5Q9P286 719 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 SHOC2Q9UQ13 582 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 FARP1Q9Y4F1 1045 aaPredicted RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 E2F8A0AVK6 867 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 ARHGEF37A1IGU5 675 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 TTC24A2A3L6 582 aaPredicted RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 TPH1P17752 444 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 YWHAQP27348 245 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 LSP1P33241 339 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 MDH1P40925 334 aaKnown RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 TUBP50607 506 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 PKN2Q16513 984 aaKnown RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 PREPLQ4J6C6 727 aaPredicted RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 EXOC3L1Q86VI1 746 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 CFAP52Q8N1V2 620 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 AGGF1Q8N302 714 aaeCLIP9.38□□□□□ -0.91
CD46-202ENST00000322918 THOC1Q96FV9 657 aaKnown RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 PRMT1Q99873 361 aaKnown RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 KLC4Q9NSK0 619 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 WBP1LQ9NX94 342 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 ZMYND8Q9ULU4 1186 aaPredicted RBP9.38□□□□□ -0.91
CD46-202ENST00000322918 USP3Q9Y6I4 520 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 PRUNE2Q8WUY3 3088 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 CLUHO75153 1309 aa9.38□□□□□ -0.91
CD46-202ENST00000322918 GOLGA6L7A0A1B0GV03 622 aa9.37□□□□□ -0.91
CD46-202ENST00000322918 A0A1W2PPM1 405 aa9.37□□□□□ -0.91
CD46-202ENST00000322918 SLC12A8A0AV02 714 aa9.37□□□□□ -0.91
CD46-202ENST00000322918 WDR27A2RRH5 827 aa9.37□□□□□ -0.91
CD46-202ENST00000322918 FSBPO95073 299 aa9.37□□□□□ -0.91
CD46-202ENST00000322918 CCR1P32246 355 aa9.37□□□□□ -0.91
CD46-202ENST00000322918 ZKSCAN8Q15776 578 aaPredicted RBP9.37□□□□□ -0.91
CD46-202ENST00000322918 RNF187Q5TA31 235 aaPredicted RBP9.37□□□□□ -0.91
CD46-202ENST00000322918 RAP1GAP2Q684P5 730 aa9.37□□□□□ -0.91
CD46-202ENST00000322918 PM20D1Q6GTS8 502 aa9.37□□□□□ -0.91
CD46-202ENST00000322918 PRPF39Q86UA1 669 aaKnown RBP9.37□□□□□ -0.91
CD46-202ENST00000322918 LRRC43Q8N309 656 aa9.37□□□□□ -0.91
CD46-202ENST00000322918 YME1L1Q96TA2 773 aa9.37□□□□□ -0.91
CD46-202ENST00000322918 ALG13Q9NP73 1137 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms