RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SNX16P57768 344 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 SULT2A1Q06520 285 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 CCDC185Q8N715 623 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 TMEM165Q9HC07 324 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 MTMR10Q9NXD2 777 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 GGT7Q9UJ14 662 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 ZNF148Q9UQR1 794 aa13.47□□□□□ -0.25
CPNE1-201ENST00000317677 TRIOBPQ9H2D6 2365 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 EOMESO95936 686 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 ADCY8P40145 1251 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 SERPINB4P48594 390 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 TKTL1P51854 596 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 RCN2Q14257 317 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 INTS6LQ5JSJ4 861 aaKnown RBP13.46□□□□□ -0.25
CPNE1-201ENST00000317677 RAB41Q5JT25 222 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 EFHC1Q5JVL4 640 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 HABP4Q5JVS0 413 aaKnown RBP13.46□□□□□ -0.25
CPNE1-201ENST00000317677 RASIP1Q5U651 963 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 SYPL2Q5VXT5 272 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 IZUMO3Q5VZ72 239 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 DCLRE1AQ6PJP8 1040 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 COLGALT2Q8IYK4 626 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 RNF168Q8IYW5 571 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-201ENST00000317677 C7orf61Q8IZ16 206 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 PLD5Q8N7P1 536 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 ZBTB8BQ8NAP8 495 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-201ENST00000317677 LRRC8CQ8TDW0 803 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 NT5C3BQ969T7 300 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 SUSD3Q96L08 255 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 UROC1Q96N76 676 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 RNF157Q96PX1 679 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 SLC2A13Q96QE2 648 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 ULBP1Q9BZM6 244 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 DNAI2Q9GZS0 605 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 RMI1Q9H9A7 625 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 TBC1D13Q9NVG8 400 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.46□□□□□ -0.25
CPNE1-201ENST00000317677 DNAJB4Q9UDY4 337 aa13.46□□□□□ -0.25
CPNE1-201ENST00000317677 APOC4-APOC2K7ER74 178 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 MDM4O15151 490 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 HNRNPCL1O60812 293 aaKnown RBP13.45□□□□□ -0.26
CPNE1-201ENST00000317677 APOC2P02655 101 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 MATKP42679 507 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 GATMP50440 423 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 NRLP54845 237 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 DAOAP59103 153 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 PHEXP78562 749 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 CALCOCO2Q13137 446 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 MPP3Q13368 585 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 P3H1Q32P28 736 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 BOLA3Q53S33 107 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 NOMO2Q5JPE7 1267 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 GLB1LQ6UWU2 654 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 UNC45BQ8IWX7 931 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 CCDC89Q8N998 374 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 DBF4BQ8NFT6 615 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 PCDH19Q8TAB3 1148 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 SLC35B4Q969S0 331 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 FAF2Q96CS3 445 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 HIC2Q96JB3 615 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 AGAP3Q96P47 875 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 KCTD15Q96SI1 283 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-201ENST00000317677 NPY6RQ99463 290 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 ACBD6Q9BR61 282 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 YIPF2Q9BWQ6 316 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 PHACTR1Q9C0D0 580 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 CSNK1G1Q9HCP0 422 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 TMPRSS4Q9NRS4 437 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 DNAJC17Q9NVM6 304 aaKnown RBP13.45□□□□□ -0.26
CPNE1-201ENST00000317677 MTRF1LQ9UGC7 380 aaKnown RBP13.45□□□□□ -0.26
CPNE1-201ENST00000317677 COLQQ9Y215 455 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-201ENST00000317677 YJEFN3A6XGL0 299 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 DNALI1O14645 258 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-201ENST00000317677 E2F6O75461 281 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 RARGP13631 454 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 PCSK1P29120 753 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 L1CAMP32004 1257 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 IFNAR2P48551 515 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 NOMO1Q15155 1222 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 PLEKHG4Q58EX7 1191 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 GSTA5Q7RTV2 222 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 CCNJLQ8IV13 435 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 SPATA18Q8TC71 538 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 PPP2R3CQ969Q6 453 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 FAM149B1Q96BN6 582 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 CCDC97Q96F63 343 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-201ENST00000317677 RMDN2Q96LZ7 410 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 LRRC4Q9HBW1 653 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 HCSTQ9UBK5 93 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 ANAPC5Q9UJX4 755 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 ITGB1BP2Q9UKP3 347 aa13.45□□□□□ -0.26
CPNE1-201ENST00000317677 ENPP3O14638 875 aa13.44□□□□□ -0.26
CPNE1-201ENST00000317677 RIPK2O43353 540 aa13.44□□□□□ -0.26
CPNE1-201ENST00000317677 PFDN1O60925 122 aa13.44□□□□□ -0.26
CPNE1-201ENST00000317677 AMHP03971 560 aa13.44□□□□□ -0.26
CPNE1-201ENST00000317677 ASLP04424 464 aa13.44□□□□□ -0.26
CPNE1-201ENST00000317677 BDNFP23560 247 aa13.44□□□□□ -0.26
CPNE1-201ENST00000317677 SULT1E1P49888 294 aa13.44□□□□□ -0.26
CPNE1-201ENST00000317677 USP46P62068 366 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms