RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PPP1R13BQ96KQ4 1090 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 BTN2A3PQ96KV6 586 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 TUBGCP2Q9BSJ2 902 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 TMEM245Q9H330 911 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.42■□□□□ 0.54
TPM1-203ENST00000317516 TJP2Q9UDY2 1190 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 CYTH4Q9UIA0 394 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 NFE2L3Q9Y4A8 694 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 CNOT1A5YKK6 2376 aaKnown RBP18.42■□□□□ 0.54
TPM1-203ENST00000317516 THADAQ6YHU6 1953 aa18.42■□□□□ 0.54
TPM1-203ENST00000317516 TRUB2O95900 331 aaKnown RBP18.41■□□□□ 0.54
TPM1-203ENST00000317516 MOCS2O96007 188 aaPredicted RBP18.41■□□□□ 0.54
TPM1-203ENST00000317516 MAPK8P45983 427 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 COPAP53621 1224 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 ST8SIA6P61647 398 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 MTA1Q13330 715 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 CDH18Q13634 790 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 DPCR1Q3MIW9 517 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 DCAF6Q58WW2 860 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 MS4A13Q5J8X5 152 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 NADSYN1Q6IA69 706 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 CARNMT1Q8N4J0 409 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 HDDC3Q8N4P3 179 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 ATP6V0D2Q8N8Y2 350 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 GPR174Q9BXC1 333 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 ASNSD1Q9NWL6 643 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 GON4LQ3T8J9 2241 aa18.41■□□□□ 0.54
TPM1-203ENST00000317516 MEI4A8MW99 385 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 FOXN3O00409 490 aaPredicted RBP18.4■□□□□ 0.54
TPM1-203ENST00000317516 PES1O00541 588 aaKnown RBP18.4■□□□□ 0.54
TPM1-203ENST00000317516 MOCS3O95396 460 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 IGLV3-19P01714 112 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 ASLP04424 464 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 CEACAM1P13688 526 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 HLA-EP13747 358 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 ABCB4P21439 1286 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 CD70P32970 193 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 RPS24P62847 133 aaKnown RBP18.4■□□□□ 0.54
TPM1-203ENST00000317516 APBA1Q02410 837 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 ZBTB16Q05516 673 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 ZC3H12AQ5D1E8 599 aaKnown RBP18.4■□□□□ 0.54
TPM1-203ENST00000317516 SH3PXD2AQ5TCZ1 1133 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 C11orf57Q6ZUT1 292 aaPredicted RBP18.4■□□□□ 0.54
TPM1-203ENST00000317516 RNF34Q969K3 372 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 TTC17Q96AE7 1141 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 GTPBP2Q9BX10 602 aaKnown RBP18.4■□□□□ 0.54
TPM1-203ENST00000317516 NUCKS1Q9H1E3 243 aaKnown RBP18.4■□□□□ 0.54
TPM1-203ENST00000317516 PDCL3Q9H2J4 239 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 SLC32A1Q9H598 525 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 SYNCQ9H7C4 482 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 CAPN10Q9HC96 672 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 CD93Q9NPY3 652 aa18.4■□□□□ 0.54
TPM1-203ENST00000317516 KIAA1522Q9P206 1035 aaPredicted RBP18.4■□□□□ 0.54
TPM1-203ENST00000317516 H0Y626 953 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 ARHGAP33O14559 1287 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 HSF2BPO75031 334 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 CCR1P32246 355 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 PTPRNQ16849 979 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 PLEKHG6Q3KR16 790 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 OR6B2Q6IFH4 312 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 CLEC17AQ6ZS10 378 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 CHSY1Q86X52 802 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 PASD1Q8IV76 773 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 LGI2Q8N0V4 545 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 WDTC1Q8N5D0 677 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 DNASE2BQ8WZ79 361 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 PRICKLE1Q96MT3 831 aaPredicted RBP18.39■□□□□ 0.53
TPM1-203ENST00000317516 CPXM1Q96SM3 734 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 PCED1AQ9H1Q7 454 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 FAM204AQ9H8W3 233 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 SIX2Q9NPC8 291 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 ANGPTL2Q9UKU9 493 aa18.39■□□□□ 0.53
TPM1-203ENST00000317516 METTL12A8MUP2 240 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 KCNU1A8MYU2 1149 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 KCNJ18B7U540 433 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 F5H5T6 163 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 OPHN1O60890 802 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 LUC7L3O95232 432 aaKnown RBP18.38■□□□□ 0.53
TPM1-203ENST00000317516 IGLV3-25P01717 112 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 DNTTP04053 509 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 TACR2P21452 398 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 CLCN1P35523 988 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 SFSWAPQ12872 951 aaKnown RBP18.38■□□□□ 0.53
TPM1-203ENST00000317516 KCNJ12Q14500 433 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 TAF5Q15542 800 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 RAP1GAP2Q684P5 730 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 ZDHHC17Q8IUH5 632 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 FAM71AQ8IYT1 594 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 DEFB106AQ8N104 65 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 CFAP52Q8N1V2 620 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 KDM1BQ8NB78 822 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 WFDC5Q8TCV5 224 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 CNTNAP3BQ96NU0 1288 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 SLC2A13Q96QE2 648 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 PPP1R9BQ96SB3 815 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 CNTNAP3Q9BZ76 1288 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 ZDHHC5Q9C0B5 715 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 PRSS16Q9NQE7 514 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 DDIT4Q9NX09 232 aa18.38■□□□□ 0.53
TPM1-203ENST00000317516 A0A1B0GTW7 788 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms