RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 RSPH1Q8WYR4 309 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 PTPRN2Q92932 1015 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 NKD2Q969F2 451 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 SLC7A6OSQ96CW6 309 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-202ENST00000315962 MIPEPQ99797 713 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 CHST12Q9NRB3 414 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 TBC1D13Q9NVG8 400 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 DLGAP2Q9P1A6 1054 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 GIT1Q9Y2X7 761 aa7.85□□□□□ -1.15
TRIM55-202ENST00000315962 CCDC195A0A1B0GUA6 201 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 TADA2AO75478 443 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 TPBGLP0DKB5 382 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 SETSIPP0DME0 302 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 LHX1P48742 406 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 PTK7Q13308 1070 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 TUSC3Q13454 348 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 CCDC6Q16204 474 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 MUM1Q2TAK8 710 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 SLC25A52Q3SY17 297 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 SPDYCQ5MJ68 293 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 MAP3K21Q5TCX8 1036 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 FAM171A1Q5VUB5 890 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ABI1Q8IZP0 508 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 AGGF1Q8N302 714 aaeCLIP7.84□□□□□ -1.15
TRIM55-202ENST00000315962 TTC39CQ8N584 583 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 PYROXD1Q8WU10 500 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 CFAP36Q96G28 342 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 FAM193BQ96PV7 902 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-202ENST00000315962 GPR62Q9BZJ7 368 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ROPN1BQ9BZX4 212 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ZNF395Q9H8N7 513 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ROPN1Q9HAT0 212 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-202ENST00000315962 USP29Q9HBJ7 922 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 POPDC2Q9HBU9 364 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 DTLQ9NZJ0 730 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 MARCOQ9UEW3 520 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-202ENST00000315962 MAD1L1Q9Y6D9 718 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 MFSD11O43934 449 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ASMTLO95671 621 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 HMBSP08397 361 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 KITP10721 976 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ODC1P11926 461 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 CYP2C18P33260 490 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ELK3P41970 407 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 APLP1P51693 650 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 GPX6P59796 221 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 MXRA7P84157 204 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 LMNB2Q03252 620 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 GPNMBQ14956 572 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 EFHC1Q5JVL4 640 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 TMEM154Q6P9G4 183 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 CES3Q6UWW8 571 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 SLC24A5Q71RS6 500 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 NLRP9Q7RTR0 991 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 TAS1R1Q7RTX1 841 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 TRABD2AQ86V40 505 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 MPP5Q8N3R9 675 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ZCCHC9Q8N567 271 aaKnown RBP7.84□□□□□ -1.15
TRIM55-202ENST00000315962 SLC25A41Q8N5S1 370 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ZNF784Q8NCA9 323 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-202ENST00000315962 APOL2Q9BQE5 337 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 TMEM109Q9BVC6 243 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 TKTL2Q9H0I9 626 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 RNPEPL1Q9HAU8 725 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ZFATQ9P243 1243 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 SLC17A6Q9P2U8 582 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 ZFP69BQ9UJL9 534 aa7.84□□□□□ -1.15
TRIM55-202ENST00000315962 A0A1B0GVG6 124 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 C9IYK1 514 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 SMIM24O75264 130 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 ATP5DP30049 168 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 YWHAGP61981 247 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRIM55-202ENST00000315962 DSC3Q14574 896 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 KPNB1Q14974 876 aaKnown RBP7.83□□□□□ -1.16
TRIM55-202ENST00000315962 NOMO1Q15155 1222 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 RCN1Q15293 331 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 CASC4Q6P4E1 433 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 TRAF7Q6Q0C0 670 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 LRRC8DQ7L1W4 858 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 METTL23Q86XA0 190 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 MIB1Q86YT6 1006 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 PALM2Q8IXS6 379 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 ARMC2Q8NEN0 867 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 TET1Q8NFU7 2136 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 FBXO27Q8NI29 283 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 CCHCR1Q8TD31 782 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 MAML1Q92585 1016 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 TTC17Q96AE7 1141 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 CLPTM1LQ96KA5 538 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 HSFY1Q96LI6 401 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 SMC6Q96SB8 1091 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 CYTH2Q99418 400 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 WDCPQ9H6R7 721 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 PCDH9Q9HC56 1237 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 ARHGEF4Q9NR80 690 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 ARL8BQ9NVJ2 186 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 WASF2Q9Y6W5 498 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 MYO7AQ13402 2215 aa7.83□□□□□ -1.16
TRIM55-202ENST00000315962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-202ENST00000315962 E2F8A0AVK6 867 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms