RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 TMEM169Q96HH4 297 aa24.33■■□□□ 1.49
SNCB-201ENST00000310112 VAT1Q99536 393 aa24.33■■□□□ 1.49
SNCB-201ENST00000310112 CAPS2Q9BXY5 557 aa24.33■■□□□ 1.49
SNCB-201ENST00000310112 PRDM12Q9H4Q4 367 aa24.33■■□□□ 1.49
SNCB-201ENST00000310112 EIF2B3Q9NR50 452 aaKnown RBP24.33■■□□□ 1.49
SNCB-201ENST00000310112 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.33■■□□□ 1.49
SNCB-201ENST00000310112 LGALS13Q9UHV8 139 aa24.33■■□□□ 1.49
SNCB-201ENST00000310112 SLC12A6Q9UHW9 1150 aa24.33■■□□□ 1.49
SNCB-201ENST00000310112 TLDC2A0PJX2 215 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 CDH16O75309 829 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 PAGE1O75459 146 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 ZDHHC11BP0C7U3 371 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 PPM1AP35813 382 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 WDR5P61964 334 aaKnown RBP24.32■■□□□ 1.48
SNCB-201ENST00000310112 PPP2R2AP63151 447 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 AUHQ13825 339 aaKnown RBP24.32■■□□□ 1.48
SNCB-201ENST00000310112 TRIP4Q15650 581 aaPredicted RBP24.32■■□□□ 1.48
SNCB-201ENST00000310112 CCDC38Q502W7 563 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 DNAJC21Q5F1R6 531 aaKnown RBP24.32■■□□□ 1.48
SNCB-201ENST00000310112 ANKRD20A2Q5SQ80 823 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 ANKRD20A1Q5TYW2 823 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 MANEALQ5VSG8 457 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 SDHAF4Q5VUM1 108 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 ANKRD20A3Q5VUR7 823 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 PRSS55Q6UWB4 352 aaPredicted RBP24.32■■□□□ 1.48
SNCB-201ENST00000310112 TAOK1Q7L7X3 1001 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 TTC9BQ8N6N2 239 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 DNAJC5GQ8N7S2 189 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 CCDC110Q8TBZ0 833 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 UBE2OQ9C0C9 1292 aaKnown RBP24.32■■□□□ 1.48
SNCB-201ENST00000310112 ETNK1Q9HBU6 452 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.32■■□□□ 1.48
SNCB-201ENST00000310112 SPG21Q9NZD8 308 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 SFMBT1Q9UHJ3 866 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 MFHAS1Q9Y4C4 1052 aa24.32■■□□□ 1.48
SNCB-201ENST00000310112 WDR27A2RRH5 827 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 TRIM43BA6NCK2 446 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 SLC38A8A6NNN8 435 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 MAP3K6O95382 1288 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 APOEP02649 317 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 GSTA2P09210 222 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 VAV1P15498 845 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 LMAN1P49257 510 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 TBX4P57082 545 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 MAGOHP61326 146 aaKnown RBP24.31■■□□□ 1.48
SNCB-201ENST00000310112 USP46P62068 366 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 AP1B1Q10567 949 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 DUSP4Q13115 394 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 BTG3Q14201 252 aaPredicted RBP24.31■■□□□ 1.48
SNCB-201ENST00000310112 PARP6Q2NL67 630 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 LRRC49Q8IUZ0 686 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 ATP6V0D2Q8N8Y2 350 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 CCNYQ8ND76 341 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 UHMK1Q8TAS1 419 aaKnown RBP24.31■■□□□ 1.48
SNCB-201ENST00000310112 EPS8L3Q8TE67 593 aaKnown RBP24.31■■□□□ 1.48
SNCB-201ENST00000310112 TRIM43Q96BQ3 446 aaPredicted RBP24.31■■□□□ 1.48
SNCB-201ENST00000310112 P2RY11Q96G91 374 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 LRRC4CQ9HCJ2 640 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 XAB2Q9HCS7 855 aaKnown RBP24.31■■□□□ 1.48
SNCB-201ENST00000310112 OSER1Q9NX31 292 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 IGSF9Q9P2J2 1179 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 TRHDEQ9UKU6 1024 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 SLC27A5Q9Y2P5 690 aa24.31■■□□□ 1.48
SNCB-201ENST00000310112 TCRBV7S3A2A0A539 114 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 SRRM3A6NNA2 597 aaPredicted RBP24.3■■□□□ 1.48
SNCB-201ENST00000310112 WASH4PA8MWX3 477 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 MLNP12872 115 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 CSF2RAP15509 400 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 CREMQ03060 361 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 RING1Q06587 406 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 TAF10Q12962 218 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 NR1H3Q13133 447 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 FNBP1LQ5T0N5 605 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 B4GALNT4Q76KP1 1039 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 DDX53Q86TM3 631 aaKnown RBP24.3■■□□□ 1.48
SNCB-201ENST00000310112 COLGALT1Q8NBJ5 622 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 LGMNQ99538 433 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 PRDM5Q9NQX1 630 aaPredicted RBP24.3■■□□□ 1.48
SNCB-201ENST00000310112 SLC24A2Q9UI40 661 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 DNAH12Q6ZR08 3092 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 GREB1Q4ZG55 1949 aa24.3■■□□□ 1.48
SNCB-201ENST00000310112 GOLGA8MH3BSY2 632 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 RNF103O00237 685 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 ABLIM3O94929 683 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 OR1D2P34982 312 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 MLLT6P55198 1093 aaPredicted RBP24.29■■□□□ 1.48
SNCB-201ENST00000310112 BBS9Q3SYG4 887 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 UBAP2Q5T6F2 1119 aaKnown RBP24.29■■□□□ 1.48
SNCB-201ENST00000310112 SNX30Q5VWJ9 437 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 PALM2Q8IXS6 379 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 ZNF461Q8TAF7 563 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 FCRL2Q96LA5 508 aaPredicted RBP24.29■■□□□ 1.48
SNCB-201ENST00000310112 VN1R3Q9BXE9 311 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 CRISPLD1Q9H336 500 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 VPS37BQ9H9H4 285 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 IL23AQ9NPF7 189 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 CSH1P0DML2 217 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 CSH2P0DML3 217 aa24.29■■□□□ 1.48
SNCB-201ENST00000310112 GARSP41250 739 aaKnown RBP24.29■■□□□ 1.48
SNCB-201ENST00000310112 PGFP49763 221 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms