RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 EIF4EBP2Q13542 120 aaPredicted RBP23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 IGDCC3Q8IVU1 814 aa23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 C10orf67Q8IYJ2 551 aa23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 SEC16BQ96JE7 1060 aa23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 PHACTR1Q9C0D0 580 aa23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 KLC2Q9H0B6 622 aa23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 GMIPQ9P107 970 aa23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 CDY1Q9Y6F8 540 aa23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 E7ESA3 106 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 CHADO15335 359 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 ADAM12O43184 909 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 ITGB8P26012 769 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 DUSP4Q13115 394 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 DENND5BQ6ZUT9 1274 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 BZW1Q7L1Q6 419 aaKnown RBP23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 TADA2BQ86TJ2 420 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 LRRC34Q8IZ02 419 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 DYDC1Q8WWB3 177 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 P2RY11Q96G91 374 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 PAWRQ96IZ0 340 aaKnown RBP23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 TRIM62Q9BVG3 475 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 CHMP2BQ9UQN3 213 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 SCML2Q9UQR0 700 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 C2CD2LO14523 706 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 PARNO95453 639 aaKnown RBP23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 MOCS2O96007 188 aaPredicted RBP23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 GPR17Q13304 367 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 GKAP1Q5VSY0 366 aaPredicted RBP23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 ARHGEF18Q6ZSZ5 1173 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 MICALCLQ6ZW33 695 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 BEND5Q7L4P6 421 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 DEPDC1BQ8WUY9 529 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 EPAS1Q99814 870 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 SMOC2Q9H3U7 446 aa23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 COL4A4P53420 1690 aaPredicted RBP23.13■■□□□ 1.29
PDLIM2-202ENST00000308354 MICAL3Q7RTP6 2002 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 MYO16Q9Y6X6 1858 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 TBC1D4O60343 1298 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 IFT88Q13099 833 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 ANKRD20A2Q5SQ80 823 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 ANKRD20A1Q5TYW2 823 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 ANKRD20A3Q5VUR7 823 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 RWDD4Q6NW29 188 aaKnown RBP23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 MON1AQ86VX9 555 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 TDRPQ86YL5 185 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 VPS52Q8N1B4 723 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 AGGF1Q8N302 714 aaeCLIP23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 ATP11CQ8NB49 1132 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 ZMYND8Q9ULU4 1186 aaPredicted RBP23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 KIAA0100Q14667 2235 aaKnown RBP23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 HACD1B0YJ81 288 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 KCNK1O00180 336 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 SMAPO00193 183 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 RNF103O00237 685 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 PAGE1O75459 146 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 CLTBP09497 229 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 ELK3P41970 407 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 MAGEA11P43364 429 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 ELAVL2Q12926 359 aaKnown RBP23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 EFTUD2Q15029 972 aaKnown RBP eCLIP23.12■■□□□ 1.296e-8■■■■□ 20.2
PDLIM2-202ENST00000308354 PDK1Q15118 436 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 PRKD1Q15139 912 aaPredicted RBP23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 LRRC26Q2I0M4 334 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 CNKSR3Q6P9H4 555 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 TAX1BP1Q86VP1 789 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 VN1R3Q9BXE9 311 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 FBXO44Q9H4M3 255 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 CWH43Q9H720 699 aa23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 PRDM5Q9NQX1 630 aaPredicted RBP23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 ATXN2Q99700 1313 aaKnown RBP23.12■■□□□ 1.29
PDLIM2-202ENST00000308354 TBX18O95935 607 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 VIMP08670 466 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 HCAR3P49019 387 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 C6orf89Q6UWU4 347 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 C3orf62Q6ZUJ4 267 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 ANKS3Q6ZW76 656 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 TRABD2AQ86V40 505 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 CACNA2D3Q8IZS8 1091 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 GIPC2Q8TF65 315 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 CELF6Q96J87 481 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 ARHGEF38Q9NXL2 777 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 RABGEF1Q9UJ41 708 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 GGA2Q9UJY4 613 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 ACTL7BQ9Y614 415 aa23.11■■□□□ 1.29
PDLIM2-202ENST00000308354 KIAA0754O94854 1291 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 CCR1P32246 355 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 GRIA1P42261 906 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 C1orf53Q5VUE5 145 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 PALM2Q8IXS6 379 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 GDAP1Q8TB36 358 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 PRDM16Q9HAZ2 1276 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 A0A0A0MRY4 1105 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 PPP1R12AO14974 1030 aaPredicted RBP23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 YWHAQP27348 245 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 PKN2Q16513 984 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 SPOUT1Q5T280 376 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 CAND1Q86VP6 1230 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 FBXO22Q8NEZ5 403 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 FBXO32Q969P5 355 aa23.1■■□□□ 1.29
PDLIM2-202ENST00000308354 SPATA13Q96N96 652 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms