RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PSMD9O00233 223 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 AVILO75366 819 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 VAPBO95292 243 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 GH1P01241 217 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 USP17L7P0C7H9 530 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 EPORP19235 508 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 GRIA3P42263 894 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 DLG4P78352 724 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 FAM45BPQ6NSW5 357 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 RBM44Q6ZP01 1051 aaKnown RBP12.91□□□□□ -0.34
USP38-201ENST00000307017 LINC00116Q8NCU8 138 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 TCF7L2Q9NQB0 619 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 DYRK1BQ9Y463 629 aa12.91□□□□□ -0.34
USP38-201ENST00000307017 FAM205AQ6ZU69 1335 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 PIK3CDO00329 1044 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ADCY6O43306 1168 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 RPS6KA4O75676 772 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 NFKB1P19838 968 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 TALDO1P37837 337 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 MAPKAPK2P49137 400 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 PTPN5P54829 565 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ARHGEF6Q15052 776 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ACOX1Q15067 660 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 TAF2Q6P1X5 1199 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 TRIM62Q9BVG3 475 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ELOVL6Q9H5J4 265 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 TMEM138Q9NPI0 162 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 CES2O00748 559 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 FASP25445 335 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 PLA2G4EQ3MJ16 856 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 KCNMB4Q86W47 210 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 GPR156Q8NFN8 814 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 NEDD1Q8NHV4 660 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 TADA1Q96BN2 335 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 GINS4Q9BRT9 223 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 SLC35C2Q9NQQ7 365 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ANGPT4Q9Y264 503 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 PPP2R3BQ9Y5P8 575 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 A0A1B0GW55 424 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 IL6P05231 212 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 DUX4L2P0CJ85 424 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 DUX4L3P0CJ86 424 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 DUX4L4P0CJ87 422 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 DUX4L5P0CJ88 424 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 DUX4L6P0CJ89 424 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 DUX4L7P0CJ90 424 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 CYP11B2P19099 503 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 CXCR3P49682 368 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 MPP3Q13368 585 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 PDIA5Q14554 519 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 CCDC185Q8N715 623 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 SPATA20Q8TB22 786 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ZNF75CPQ92670 426 aaPredicted RBP12.9□□□□□ -0.34
USP38-201ENST00000307017 PDCD10Q9BUL8 212 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ABCB9Q9NP78 766 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 DUX4Q9UBX2 424 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 KLHL3Q9UH77 587 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 TK2O00142 265 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 SSNA1O43805 119 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ELF3P78545 371 aaPredicted RBP12.9□□□□□ -0.34
USP38-201ENST00000307017 CASP12Q6UXS9 341 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 TTC7BQ86TV6 843 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 RMND5BQ96G75 393 aaPredicted RBP12.9□□□□□ -0.34
USP38-201ENST00000307017 SLC9A7Q96T83 725 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 DCLRE1BQ9H816 532 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 FBXO6Q9NRD1 293 aaPredicted RBP12.9□□□□□ -0.34
USP38-201ENST00000307017 RAD51BO15315 384 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ENTPD5O75356 428 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 SCGNO76038 276 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ADRA1DP25100 572 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 LRPAP1P30533 357 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 TKTL1P51854 596 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ZNF844Q08AG5 666 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 ERMARDQ5T6L9 678 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 LPCAT4Q643R3 524 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 LRRC49Q8IUZ0 686 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 GRIN3AQ8TCU5 1115 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 SEPT1Q8WYJ6 367 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 C1orf50Q9BV19 199 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 BHLHE41Q9C0J9 482 aaPredicted RBP12.9□□□□□ -0.34
USP38-201ENST00000307017 CHST7Q9NS84 486 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 POLR1DQ9Y2S0 133 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 MAGI3Q5TCQ9 1506 aa12.9□□□□□ -0.34
USP38-201ENST00000307017 A0A087WZ62 844 aa12.9□□□□□ -0.35
USP38-201ENST00000307017 LYPLA1O75608 230 aaPredicted RBP12.9□□□□□ -0.35
USP38-201ENST00000307017 AKAP3O75969 853 aa12.9□□□□□ -0.35
USP38-201ENST00000307017 RGS20O76081 388 aa12.9□□□□□ -0.35
USP38-201ENST00000307017 MT-ND1P03886 318 aa12.9□□□□□ -0.35
USP38-201ENST00000307017 GSTT1P30711 240 aa12.9□□□□□ -0.35
USP38-201ENST00000307017 C15orf59Q2T9L4 293 aaPredicted RBP12.9□□□□□ -0.35
USP38-201ENST00000307017 RFX4Q33E94 735 aa12.9□□□□□ -0.35
USP38-201ENST00000307017 TNS4Q8IZW8 715 aa12.9□□□□□ -0.35
USP38-201ENST00000307017 GAL3ST1Q99999 423 aa12.9□□□□□ -0.35
USP38-201ENST00000307017 MTG1Q9BT17 334 aaPredicted RBP12.9□□□□□ -0.35
USP38-201ENST00000307017 ALG9Q9H6U8 611 aa12.9□□□□□ -0.35
USP38-201ENST00000307017 NINJ2Q9NZG7 142 aa12.9□□□□□ -0.35
USP38-201ENST00000307017 A0A1W2PQ67 120 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 HMGCRP04035 888 aa12.89□□□□□ -0.35
USP38-201ENST00000307017 CNPP09543 421 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms