RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 NCAM2O15394 837 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 COCHO43405 550 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 ZNF189O75820 626 aaPredicted RBP18.08■□□□□ 0.48
KRT28-201ENST00000306658 HMBSP08397 361 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 FAM153BP0C7A2 387 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 CLCN4P51793 760 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 GDF10P55107 478 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 FAM153CQ494X1 144 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 LRRC31Q6UY01 552 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 SPRED2Q7Z698 418 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 FBXO25Q8TCJ0 367 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 GDAP1L1Q96MZ0 367 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 OLFM3Q96PB7 478 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 NEUROG2Q9H2A3 272 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 FAM153AQ9UHL3 310 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 ANAPC5Q9UJX4 755 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 MFHAS1Q9Y4C4 1052 aa18.08■□□□□ 0.48
KRT28-201ENST00000306658 E9PAM4 449 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 H3BNC9 293 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 PPP1R12AO14974 1030 aaPredicted RBP18.07■□□□□ 0.48
KRT28-201ENST00000306658 KCNN4O15554 427 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 MFSD11O43934 449 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 MAP3K6O95382 1288 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 F11P03951 625 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 ZSCAN5DPP0CG00 497 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 ETS1P14921 441 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 HOXC13P31276 330 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 GGCXP38435 758 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 GPS1Q13098 491 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 GPM6BQ13491 265 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 CASP8Q14790 479 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 P3H1Q32P28 736 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 PPM1LQ5SGD2 360 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 MANEALQ5VSG8 457 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 ZDHHC24Q6UX98 284 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 GLIS1Q8NBF1 620 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 TFB1MQ8WVM0 346 aaKnown RBP18.07■□□□□ 0.48
KRT28-201ENST00000306658 QKIQ96PU8 341 aaKnown RBP eCLIP18.07■□□□□ 0.48
KRT28-201ENST00000306658 TSPYL1Q9H0U9 437 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 USP29Q9HBJ7 922 aa18.07■□□□□ 0.48
KRT28-201ENST00000306658 XPO7Q9UIA9 1087 aaKnown RBP18.07■□□□□ 0.48
KRT28-201ENST00000306658 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 OAS1P00973 400 aaKnown RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 MX2P20592 715 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 RBL1P28749 1068 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 HARS2P49590 506 aaKnown RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 ITGA8P53708 1063 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 CAMK1Q14012 370 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 MS4A13Q5J8X5 152 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 PIK3R6Q5UE93 754 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 IZUMO3Q5VZ72 239 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 HEATR6Q6AI08 1181 aaKnown RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 PCGF5Q86SE9 256 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 PRUNE1Q86TP1 453 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 LZTR1Q8N653 840 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 PLD4Q96BZ4 506 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 RTP4Q96DX8 246 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 BRD8Q9H0E9 1235 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 ZNF334Q9HCZ1 680 aaPredicted RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 DONSONQ9NYP3 566 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 TPX2Q9ULW0 747 aaKnown RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 GBF1Q92538 1859 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 MTCL1Q9Y4B5 1905 aaKnown RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 DNALI1O14645 258 aaPredicted RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 IRS1P35568 1242 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 C4orf22Q6V702 233 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 B4GALNT4Q76KP1 1039 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 TMEM150AQ86TG1 271 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 IL21Q9HBE4 155 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 PPARGC1AQ9UBK2 798 aaKnown RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 DPP7Q9UHL4 492 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 YBX2Q9Y2T7 364 aaKnown RBP18.06■□□□□ 0.48
KRT28-201ENST00000306658 CLUHO75153 1309 aa18.06■□□□□ 0.48
KRT28-201ENST00000306658 MAP2K7O14733 419 aa18.05■□□□□ 0.48
KRT28-201ENST00000306658 GABRR2P28476 465 aa18.05■□□□□ 0.48
KRT28-201ENST00000306658 RPL22P35268 128 aaKnown RBP18.05■□□□□ 0.48
KRT28-201ENST00000306658 SLC11A2P49281 568 aa18.05■□□□□ 0.48
KRT28-201ENST00000306658 AUHQ13825 339 aaKnown RBP18.05■□□□□ 0.48
KRT28-201ENST00000306658 MREGQ8N565 214 aa18.05■□□□□ 0.48
KRT28-201ENST00000306658 CCNYQ8ND76 341 aa18.05■□□□□ 0.48
KRT28-201ENST00000306658 MRPS31Q92665 395 aaKnown RBP18.05■□□□□ 0.48
KRT28-201ENST00000306658 RNF38Q9H0F5 515 aa18.05■□□□□ 0.48
KRT28-201ENST00000306658 PAK5Q9P286 719 aa18.05■□□□□ 0.48
KRT28-201ENST00000306658 MSRAQ9UJ68 235 aa18.05■□□□□ 0.48
KRT28-201ENST00000306658 VANGL2Q9ULK5 521 aa18.05■□□□□ 0.48
KRT28-201ENST00000306658 NEU3Q9UQ49 428 aa18.05■□□□□ 0.48
KRT28-201ENST00000306658 ANAPC1Q9H1A4 1944 aa18.04■□□□□ 0.48
KRT28-201ENST00000306658 MYO7AQ13402 2215 aa18.04■□□□□ 0.48
KRT28-201ENST00000306658 C2orf78A6NCI8 922 aa18.04■□□□□ 0.48
KRT28-201ENST00000306658 STK10O94804 968 aaKnown RBP18.04■□□□□ 0.48
KRT28-201ENST00000306658 CDC25CP30307 473 aa18.04■□□□□ 0.48
KRT28-201ENST00000306658 KCNQ1P51787 676 aa18.04■□□□□ 0.48
KRT28-201ENST00000306658 AP1B1Q10567 949 aa18.04■□□□□ 0.48
KRT28-201ENST00000306658 RAB30Q15771 203 aa18.04■□□□□ 0.48
KRT28-201ENST00000306658 HIBCHQ6NVY1 386 aaPredicted RBP18.04■□□□□ 0.48
KRT28-201ENST00000306658 C14orf80Q86SX3 495 aa18.04■□□□□ 0.48
KRT28-201ENST00000306658 HTR3CQ8WXA8 447 aa18.04■□□□□ 0.48
KRT28-201ENST00000306658 AZIN2Q96A70 460 aa18.04■□□□□ 0.48
KRT28-201ENST00000306658 GCNAQ96QF7 691 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms