RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 XPO7Q9UIA9 1087 aaKnown RBP11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 HS3ST4Q9Y661 456 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 A0A0C4DFX4 3053 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ZDBF2Q9HCK1 2354 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 H0Y626 953 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ENDOD1O94919 500 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 IPO7O95373 1038 aaKnown RBP11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 H2AFZP0C0S5 128 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TNFRSF4P43489 277 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SGSHP51688 502 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 EFHC2Q5JST6 749 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SCYL2Q6P3W7 929 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 Q6ZS52 159 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 H2AFVQ71UI9 128 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 BNIPLQ7Z465 357 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TRMT11Q7Z4G4 463 aaKnown RBP11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ZNF687Q8N1G0 1237 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CARNMT1Q8N4J0 409 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RPLP0P6Q8NHW5 317 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 WFIKKN2Q8TEU8 576 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 FNIP1Q8TF40 1166 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PANX2Q96RD6 677 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 HAPLN3Q96S86 360 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 NCAPGQ9BPX3 1015 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 NUP85Q9BW27 656 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ADAM33Q9BZ11 813 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 FBRSL1Q9HCM7 1045 aaKnown RBP11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SPTLC3Q9NUV7 552 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ANAPC7Q9UJX3 599 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 VANGL2Q9ULK5 521 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SLC27A6Q9Y2P4 619 aa11.37□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 A0A1B0GVM2 712 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GOLGA6L3A6NEY3 463 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TCAF2A6NFQ2 919 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 LUC7L3O95232 432 aaKnown RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MOCS3O95396 460 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TIE1P35590 1138 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GGCXP38435 758 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GALCP54803 685 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 OXCT1P55809 520 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 HDAC4P56524 1084 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RPS24P62847 133 aaKnown RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MRPS21P82921 87 aaKnown RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MTAPQ13126 283 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 FZD5Q13467 585 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 AUHQ13825 339 aaKnown RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 EIF4HQ15056 248 aaKnown RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ASTE1Q2TB18 679 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 HSF5Q4G112 596 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SDE2Q6IQ49 451 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SLFN11Q7Z7L1 901 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 C1orf210Q8IVY1 113 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CCDC170Q8IYT3 715 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 AHI1Q8N157 1196 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CFAP52Q8N1V2 620 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PHTF2Q8N3S3 785 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SPEM1Q8N4L4 309 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ZNF513Q8N8E2 541 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ZNF564Q8TBZ8 553 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CENPIQ92674 756 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 NTAN1Q96AB6 310 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PRMT1Q99873 361 aaKnown RBP11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CIPCQ9C0C6 399 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 IRF2BPLQ9H1B7 796 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CTTNBP2NLQ9P2B4 639 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 UVRAGQ9P2Y5 699 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 LCMT1Q9UIC8 334 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GGA2Q9UJY4 613 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SLC8A2Q9UPR5 921 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 FANCMQ8IYD8 2048 aa11.36□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CACNA1IQ9P0X4 2223 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TMEM191CA6NGB0 347 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 E9PAM4 449 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 K7EQS6 105 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GFRA2O00451 464 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TRIM24O15164 1050 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CYP1A2P05177 515 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CISD3P0C7P0 127 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TMEM253P0C7T8 217 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PABPC1P11940 636 aaKnown RBP11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CXCL12P48061 93 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PTPN5P54829 565 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 AIF1P55008 147 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GSDMDP57764 484 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 OGDHQ02218 1023 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PIGHQ14442 188 aaPredicted RBP11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ACAP1Q15027 740 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ANGPT1Q15389 498 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SPA17Q15506 151 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 C2orf27AQ580R0 203 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 EOGTQ5NDL2 527 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SH3PXD2AQ5TCZ1 1133 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 FBXL22Q6P050 247 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CHST9Q7L1S5 443 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CIR1Q86X95 450 aaPredicted RBP11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TMTC1Q8IUR5 882 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 USP33Q8TEY7 942 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 C1orf74Q96LT6 269 aa11.35□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GRPEL1Q9HAV7 217 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms