RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 UNC93B1Q9H1C4 597 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 ARHGEF38Q9NXL2 777 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 ZC3H7BQ9UGR2 993 aaKnown RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 SFMBT1Q9UHJ3 866 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 NUDT5Q9UKK9 219 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 LAMA2P24043 3122 aaKnown RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 MYO1CO00159 1063 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 TRIM66O15016 1216 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 MSI1O43347 362 aaKnown RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 UGT1A9O60656 530 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 OPHN1O60890 802 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 PRKCHP24723 683 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 PSMB4P28070 264 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 MSH2P43246 934 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 MRPL58Q14197 206 aaKnown RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 SLC1A5Q15758 541 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 ARL13BQ3SXY8 428 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 VARS2Q5ST30 1063 aaKnown RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 GKAP1Q5VSY0 366 aaPredicted RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 TRMT10BQ6PF06 316 aaKnown RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 C4orf50Q6ZRC1 276 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 DEPDC1BQ8WUY9 529 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 DYDC1Q8WWB3 177 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 SMC6Q96SB8 1091 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 EBNA1BP2Q99848 306 aaKnown RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 ELAC2Q9BQ52 826 aaKnown RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 UGT1A7Q9HAW7 530 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 UGT1A10Q9HAW8 530 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 UGT1A8Q9HAW9 530 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 PIH1D1Q9NWS0 290 aaKnown RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 ABI2Q9NYB9 513 aaPredicted RBP6.74□□□□□ -1.33
USP47-201ENST00000305481 SEPT10Q9P0V9 454 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 KANSL3Q9P2N6 904 aa6.74□□□□□ -1.33
USP47-201ENST00000305481 ARHGEF37A1IGU5 675 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 PPP1R12AO14974 1030 aaPredicted RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 IRAK2O43187 625 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 TADA2AO75478 443 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 SPAG6O75602 509 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 MYCP01106 439 aaPredicted RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 ATP2A2P16615 1042 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 TAC1P20366 129 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 PTPN3P26045 913 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 EPHB2P29323 1055 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 USP46P62068 366 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 CRADDP78560 199 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 PPIDQ08752 370 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 FAAP100Q0VG06 881 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 OLIG2Q13516 323 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 SPRED3Q2MJR0 410 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 RSPO2Q6UXX9 243 aaPredicted RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 TAX1BP1Q86VP1 789 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 SCN4BQ8IWT1 228 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 CACNA2D3Q8IZS8 1091 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 ARNTL2Q8WYA1 636 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 LRRC39Q96DD0 335 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 OXNAD1Q96HP4 312 aaPredicted RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 SERAC1Q96JX3 654 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 PGLYRP2Q96PD5 576 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 KLF6Q99612 283 aaPredicted RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 C12orf65Q9H3J6 166 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 ABCC13Q9NSE7 274 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 FGFR1OP2Q9NVK5 253 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 MARCH5Q9NX47 278 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 NKIRAS1Q9NYS0 192 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 SENP1Q9P0U3 644 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 NUP205Q92621 2012 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 A0A1W2PQH9 124 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 GOLGA8RI6L899 631 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 VNN2O95498 520 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 OAS1P00973 400 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 COL6A1P12109 1028 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 CD68P34810 354 aaPredicted RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 FDFT1P37268 417 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 GALNT2Q10471 571 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 PARP6Q2NL67 630 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 CGB2Q6NT52 195 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 YTHDF3Q7Z739 585 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 SPATS2Q86XZ4 545 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 UNC5BQ8IZJ1 945 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 BANPQ8N9N5 519 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 ATAD1Q8NBU5 361 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 GPR152Q8TDT2 470 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 SGSM3Q96HU1 749 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 MAGEB18Q96M61 343 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 ATXN2Q99700 1313 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 OSBPL2Q9H1P3 480 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 SMOC2Q9H3U7 446 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 ELAC1Q9H777 363 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 XAB2Q9HCS7 855 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 EIF2B3Q9NR50 452 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 IGSF9Q9P2J2 1179 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 SMG5Q9UPR3 1016 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 MAD1L1Q9Y6D9 718 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 DNM1LO00429 736 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 TRDMT1O14717 391 aaKnown RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 ZBTB24O43167 697 aaPredicted RBP6.73□□□□□ -1.33
USP47-201ENST00000305481 SNX3O60493 162 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 PAGE1O75459 146 aa6.73□□□□□ -1.33
USP47-201ENST00000305481 SOAT2O75908 522 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms