RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 DDX56Q9NY93 547 aaKnown RBP28.04■■■□□ 2.08
HDAC3-201ENST00000305264 NEU3Q9UQ49 428 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 LRRD1A4D1F6 860 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 LOC730098B7Z3J9 87 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 E9PAM4 449 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 TSPAN3O60637 253 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 SRGAP2O75044 1071 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 LRIG2O94898 1065 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 ATP1A1P05023 1023 aaKnown RBP28.04■■■□□ 2.08
HDAC3-201ENST00000305264 KRT81Q14533 505 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 RPS6KA1Q15418 735 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 LGI2Q8N0V4 545 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 KCTD6Q8NC69 237 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 DEPDC1BQ8WUY9 529 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 KCNK12Q9HB15 430 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 DOCK4Q8N1I0 1966 aa28.04■■■□□ 2.08
HDAC3-201ENST00000305264 F5H5T6 163 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 GFRA2O00451 464 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 SLC9A3R1O14745 358 aaPredicted RBP28.03■■■□□ 2.08
HDAC3-201ENST00000305264 IRAK1P51617 712 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 NRG1Q02297 640 aaPredicted RBP28.03■■■□□ 2.08
HDAC3-201ENST00000305264 EML3Q32P44 896 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 DCAF12L1Q5VU92 463 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 CPXM2Q8N436 756 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 FAM71BQ8TC56 605 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 IGSF8Q969P0 613 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 PSMB7Q99436 277 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 FAM83CQ9BQN1 747 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 THG1LQ9NWX6 298 aaKnown RBP28.03■■■□□ 2.08
HDAC3-201ENST00000305264 MYO10Q9HD67 2058 aa28.03■■■□□ 2.08
HDAC3-201ENST00000305264 C3orf70A6NLC5 250 aaPredicted RBP28.02■■■□□ 2.08
HDAC3-201ENST00000305264 ASGR2P07307 311 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 GOT1P17174 413 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 KDELR1P24390 212 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 IFNAR2P48551 515 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 RWDD2BP57060 319 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 ETF1P62495 437 aaKnown RBP28.02■■■□□ 2.08
HDAC3-201ENST00000305264 DPYSL3Q14195 570 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 ANKS1BQ7Z6G8 1248 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 ADHFE1Q8IWW8 467 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 YAF2Q8IY57 180 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 RNF25Q96BH1 459 aaPredicted RBP28.02■■■□□ 2.08
HDAC3-201ENST00000305264 OTUB2Q96DC9 234 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 EPAS1Q99814 870 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 DDX50Q9BQ39 737 aaKnown RBP28.02■■■□□ 2.08
HDAC3-201ENST00000305264 COL4A3Q01955 1670 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 ARSAP15289 507 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 CHKAP35790 457 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 ZP2Q05996 745 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 MMRN1Q13201 1228 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 TPGS1Q6ZTW0 290 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 TSC1Q92574 1164 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 RPRD1AQ96P16 312 aaPredicted RBP28.02■■■□□ 2.08
HDAC3-201ENST00000305264 CALN1Q9BXU9 219 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 EBF3Q9H4W6 596 aa28.02■■■□□ 2.08
HDAC3-201ENST00000305264 CWC15Q9P013 229 aaKnown RBP28.02■■■□□ 2.08
HDAC3-201ENST00000305264 TCF20Q9UGU0 1960 aaKnown RBP28.01■■■□□ 2.08
HDAC3-201ENST00000305264 GDI1P31150 447 aa28.01■■■□□ 2.07
HDAC3-201ENST00000305264 RPS24P62847 133 aaKnown RBP28.01■■■□□ 2.07
HDAC3-201ENST00000305264 TNK2Q07912 1038 aa28.01■■■□□ 2.07
HDAC3-201ENST00000305264 ACBD5Q5T8D3 534 aaPredicted RBP28.01■■■□□ 2.07
HDAC3-201ENST00000305264 CIR1Q86X95 450 aaPredicted RBP28.01■■■□□ 2.07
HDAC3-201ENST00000305264 ADGRG2Q8IZP9 1017 aa28.01■■■□□ 2.07
HDAC3-201ENST00000305264 CFAP52Q8N1V2 620 aa28.01■■■□□ 2.07
HDAC3-201ENST00000305264 BHMTQ93088 406 aa28.01■■■□□ 2.07
HDAC3-201ENST00000305264 TRMT61BQ9BVS5 477 aaKnown RBP28.01■■■□□ 2.07
HDAC3-201ENST00000305264 IL4RP24394 825 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 PDK2Q15119 407 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 MFSD7Q6UXD7 560 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 SYT10Q6XYQ8 523 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 EXD1Q8NHP7 514 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 ATXN2LQ8WWM7 1075 aaKnown RBP28■■■□□ 2.07
HDAC3-201ENST00000305264 DNAI1Q9UI46 699 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 IGLV3-10A0A075B6K4 115 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 EEF2KO00418 725 aaKnown RBP28■■■□□ 2.07
HDAC3-201ENST00000305264 TPI1P60174 286 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 ZNF211Q13398 564 aaPredicted RBP28■■■□□ 2.07
HDAC3-201ENST00000305264 ODF2Q5BJF6 829 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 AADACL2Q6P093 401 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 LRRC31Q6UY01 552 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 TMEM25Q86YD3 366 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 CSPG4P5Q96PW8 444 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 HPS4Q9NQG7 708 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 SPHK2Q9NRA0 654 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 MPP6Q9NZW5 540 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 PRKAG3Q9UGI9 489 aa28■■■□□ 2.07
HDAC3-201ENST00000305264 VCANP13611 3396 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 ZRANB2O95218 330 aaKnown RBP eCLIP27.99■■■□□ 2.07
HDAC3-201ENST00000305264 CYP17A1P05093 508 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 PYGMP11217 842 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 LLGL1Q15334 1064 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 LY6G5CQ5SRR4 150 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 RWDD4Q6NW29 188 aaKnown RBP27.99■■■□□ 2.07
HDAC3-201ENST00000305264 RFX8Q6ZV50 586 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 CCDC50Q8IVM0 306 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 UBE2Q2Q8WVN8 375 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 TBC1D31Q96DN5 1066 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 ZNF670Q9BS34 389 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 IGSF9Q9P2J2 1179 aa27.99■■■□□ 2.07
HDAC3-201ENST00000305264 KCNK3O14649 394 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms