RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 RNF34Q969K3 372 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 ERLEC1Q96DZ1 483 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 RRN3Q9NYV6 651 aa27.4■■□□□ 1.98
CDKN2A-201ENST00000304494 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 LRRC10BA6NIK2 292 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 LGALS16A8MUM7 142 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 KCNU1A8MYU2 1149 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 AP5Z1O43299 807 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 ATP5BP06576 529 aaKnown RBP27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 NOS2P35228 1153 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 GABRB2P47870 512 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 KLK7P49862 253 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 ADIPOR2Q86V24 386 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 ERICH1Q86X53 443 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 TMEFF1Q8IYR6 380 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 C18orf8Q96DM3 657 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 PCMTD1Q96MG8 357 aaPredicted RBP27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 XPO7Q9UIA9 1087 aaKnown RBP27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 SIK3Q9Y2K2 1263 aa27.39■■□□□ 1.98
CDKN2A-201ENST00000304494 RALGAPA1Q6GYQ0 2036 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 PLXND1Q9Y4D7 1925 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 SYNJ2BP-COX16A0A087WUM0 186 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 EPHX1P07099 455 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 ZNF18P17022 549 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 POLR2EP19388 210 aaKnown RBP27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 TACR2P21452 398 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 SCNN1AP37088 669 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 DPP6P42658 865 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 RPS24P62847 133 aaKnown RBP27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 CDH18Q13634 790 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 SYCP1Q15431 976 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 FNDC3BQ53EP0 1204 aaKnown RBP27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 RAP1GAP2Q684P5 730 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 MBLAC2Q68D91 279 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 KIAA1324Q6UXG2 1013 aaKnown RBP27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 CHSY1Q86X52 802 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 LGI2Q8N0V4 545 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 CARNMT1Q8N4J0 409 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 WFDC5Q8TCV5 224 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 SPAG5Q96R06 1193 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 PRDM16Q9HAZ2 1276 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 COX16Q9P0S2 106 aa27.38■■□□□ 1.97
CDKN2A-201ENST00000304494 IGHV1OR15-9A0A0B4J2B8 117 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 F5H5T6 163 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 GFPT2O94808 682 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 DLDP09622 509 aaKnown RBP27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 PRKCHP24723 683 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 CD70P32970 193 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 SOX5P35711 763 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 MATKP42679 507 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 ATXN1P54253 815 aaKnown RBP27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 JAM2P57087 298 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 RPL6Q02878 288 aaKnown RBP27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 UBXN1Q04323 297 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 NCAPHQ15003 741 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 METTL3Q86U44 580 aaKnown RBP27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 CFAP52Q8N1V2 620 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 AOPEPQ8N6M6 819 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 NEK11Q8NG66 645 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 MYEOVQ96EZ4 313 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 SLC6A17Q9H1V8 727 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 SMOC1Q9H4F8 434 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 NLRC4Q9NPP4 1024 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 TMEM51Q9NW97 253 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 CYP8B1Q9UNU6 501 aa27.37■■□□□ 1.97
CDKN2A-201ENST00000304494 SLC30A4O14863 429 aa27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 GDF9O60383 454 aa27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 LUC7L3O95232 432 aaKnown RBP27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 MMEP08473 750 aa27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 LIMK1P53667 647 aa27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 NME3Q13232 169 aa27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 TTC39BQ5VTQ0 682 aaPredicted RBP27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 CYB5D2Q8WUJ1 264 aa27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 BPIFA3Q9BQP9 254 aa27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 TMEM245Q9H330 911 aa27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 STAP1Q9ULZ2 295 aa27.36■■□□□ 1.97
CDKN2A-201ENST00000304494 H0Y626 953 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 M0QYT0 321 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 EPHB6O15197 1021 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 STAT1P42224 750 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 LMAN2Q12907 356 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 ANO6Q4KMQ2 910 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 RABGAP1LQ5R372 815 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 FAM102AQ5T9C2 384 aaPredicted RBP27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 LYSMD4Q5XG99 296 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 CAVIN1Q6NZI2 390 aaKnown RBP27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 XYLT1Q86Y38 959 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 TMPRSS6Q8IU80 811 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 PIGKQ92643 395 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 PRCCQ92733 491 aaPredicted RBP27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 LMLNQ96KR4 655 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 ERGIC2Q96RQ1 377 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 MKRN2Q9H000 416 aaKnown RBP27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 HSD3B7Q9H2F3 369 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 NOCTQ9UK39 431 aaKnown RBP27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 THADAQ6YHU6 1953 aa27.35■■□□□ 1.97
CDKN2A-201ENST00000304494 KHNYNO15037 678 aaKnown RBP27.34■■□□□ 1.97
CDKN2A-201ENST00000304494 MOCS3O95396 460 aa27.34■■□□□ 1.97
CDKN2A-201ENST00000304494 ASLP04424 464 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms