RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SPIDRQ14159 915 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 TRMT5Q32P41 509 aaKnown RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ERCC6L2Q5T890 1561 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 CCSAPQ6IQ19 270 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ARMC8Q8IUR7 673 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 GDPD5Q8WTR4 605 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ANKS1AQ92625 1134 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 SLC4A9Q96Q91 983 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 TULP4Q9NRJ4 1543 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 VPS45Q9NRW7 570 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 TOR4AQ9NXH8 423 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 PSIP1O75475 530 aaKnown RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 JCHAINP01591 159 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 MYBPC1Q00872 1141 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 C11orf63Q6NUN7 778 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ZNF621Q6ZSS3 439 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 METTL16Q86W50 562 aaKnown RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ARHGEF19Q8IW93 802 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ULK2Q8IYT8 1036 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 FBXO39Q8N4B4 442 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 GTF3C2Q8WUA4 911 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 IPCEF1Q8WWN9 437 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 DGCR6LQ9BY27 220 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 TCF7L2Q9NQB0 619 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 SAE1Q9UBE0 346 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 FAM92AA1XBS5 289 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 GPR182O15218 404 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 MTA2O94776 668 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 MPOP05164 745 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 SLC26A11Q86WA9 606 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ZFRQ96KR1 1074 aaKnown RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ZSWIM1Q9BR11 485 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 TARS2Q9BW92 718 aaKnown RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 PABPC3Q9H361 631 aaKnown RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 DSN1Q9H410 356 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 GMEB1Q9Y692 573 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ZNF879B4DU55 563 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 TNFAIP8O95379 198 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 PTPN4P29074 926 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 CBX5P45973 191 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 CLK3P49761 638 aaKnown RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ORC1Q13415 861 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 DGCR6Q14129 220 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ZNHIT3Q15649 155 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 INO80DQ53TQ3 878 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-201ENST00000302528 EXOC3L1Q86VI1 746 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 HAVCR1Q96D42 359 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 TMEM237Q96Q45 408 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 YME1L1Q96TA2 773 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 NUDT12Q9BQG2 462 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 REEP1Q9H902 201 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 GPATCH2LQ9NWQ4 482 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 REREQ9P2R6 1566 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 CCDC182A6NF36 153 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 HOXA2O43364 376 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 SLC26A4O43511 780 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 SLC25A27O95847 323 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 NTSP30990 170 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 NPY2RP49146 381 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 CORO7P57737 925 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 GRB14Q14449 540 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 MILR1Q7Z6M3 343 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ACOT1Q86TX2 421 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 DHRSXQ8N5I4 330 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 ITFG1Q8TB96 612 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 MYLPFQ96A32 169 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 RABGEF1Q9UJ41 708 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 GTF3C4Q9UKN8 822 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 HECW2Q9P2P5 1572 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 NCAPD2Q15021 1401 aa10.6□□□□□ -0.71
CLIP1-201ENST00000302528 TMEM2Q9UHN6 1383 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 A0A0X1KG70 313 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 SNAP23O00161 211 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 O00370 1275 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 IFNA16P05015 189 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 MYL4P12829 197 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 TYMPP19971 482 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 SCTRP47872 440 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 FASTKQ14296 549 aaKnown RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 HLFQ16534 295 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 CYP2A13Q16696 494 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 TCHHL1Q5QJ38 904 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 KDM7AQ6ZMT4 941 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ZDHHC13Q8IUH4 622 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 CYP4X1Q8N118 509 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ATG4AQ8WYN0 398 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 STARD8Q92502 1023 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 MLPHQ9BV36 600 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 PTGFRNQ9P2B2 879 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 CRNNQ9UBG3 495 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 CCDC162PA2VCL2 907 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 AGRPO00253 132 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 LIN7AO14910 233 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ZC3H11AO75152 810 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 OR56A5P0C7T3 313 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 ZNF7P17097 686 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 POLD2P49005 469 aa10.59□□□□□ -0.71
CLIP1-201ENST00000302528 FXR1P51114 621 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLIP1-201ENST00000302528 MAPK7Q13164 816 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms