RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 MED4Q9NPJ6 270 aa7.3□□□□□ -1.24
RAG1-201ENST00000299440 CTNNAL1Q9UBT7 734 aa7.3□□□□□ -1.24
RAG1-201ENST00000299440 ZFP69BQ9UJL9 534 aa7.3□□□□□ -1.24
RAG1-201ENST00000299440 A0A0B4J269 797 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 KCNK1O00180 336 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 TRUB2O95900 331 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 CLNS1AP54105 237 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 KCNK10P57789 538 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 CYP4F8P98187 520 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 TAF10Q12962 218 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 DENND1BQ6P3S1 775 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 COLGALT1Q8NBJ5 622 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 GPR20Q99678 358 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 ZNF518BQ9C0D4 1074 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 IL1RAPL1Q9NZN1 696 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 IGF2BP3O00425 579 aaKnown RBP eCLIP7.29□□□□□ -1.24
RAG1-201ENST00000299440 SLC35G4P0C7Q5 338 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 PSEN1P49768 467 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 NME5P56597 212 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 MAGOHP61326 146 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 OTUD4Q01804 1114 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 CYP2A13Q16696 494 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 C15orf52Q6ZUT6 534 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 KIF2CQ99661 725 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 TUBB6Q9BUF5 446 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 POLR1EQ9GZS1 481 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 SH3BP4Q9P0V3 963 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 WARS2Q9UGM6 360 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 MDM4O15151 490 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 GYG2O15488 501 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 NOS2P35228 1153 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 MED21Q13503 144 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 MTF1Q14872 753 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 FBXO38Q6PIJ6 1188 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 KLK6Q92876 244 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 C18orf25Q96B23 403 aaPredicted RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 REXO5Q96IC2 774 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 TGS1Q96RS0 853 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 TRABDQ9H4I3 376 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 GPAMQ9HCL2 828 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 AHSPQ9NZD4 102 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 CRYL1Q9Y2S2 319 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 OR10H2O60403 315 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 AKAP3O75969 853 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 TMEM253P0C7T8 217 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 PYGMP11217 842 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 ERFP50548 548 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 CCNG1P51959 295 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 HDAC4P56524 1084 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 CSHL1Q14406 222 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 ZNF618Q5T7W0 954 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 CENPPQ6IPU0 288 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 CNKSR3Q6P9H4 555 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 RGS9BPQ6ZS82 235 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 TUBGCP3Q96CW5 907 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 FAM167BQ9BTA0 163 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.29□□□□□ -1.24
RAG1-201ENST00000299440 SLC27A6Q9Y2P4 619 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 ADGRB2O60241 1585 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 CTDNEP1O95476 244 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 TCF3P15923 654 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 INAVAQ3KP66 663 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 TMEM63BQ5T3F8 832 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 FBXO46Q6PJ61 603 aaPredicted RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 FAM180AQ6UWF9 173 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 RFX8Q6ZV50 586 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 HORMAD1Q86X24 394 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 MSL3Q8N5Y2 521 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 EFCAB3Q8N7B9 438 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 SPPL2BQ8TCT7 592 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 DIS3LQ8TF46 1054 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 ZNF606Q8WXB4 792 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 ATG4AQ8WYN0 398 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 KIAA1522Q9P206 1035 aaPredicted RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 VTI1BQ9UEU0 232 aa7.29□□□□□ -1.24
RAG1-201ENST00000299440 DRG1Q9Y295 367 aaKnown RBP7.29□□□□□ -1.24
RAG1-201ENST00000299440 A0A0A6YYK5 440 aaPredicted RBP7.28□□□□□ -1.24
RAG1-201ENST00000299440 CHURC1-FNTBB4DL54 471 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 SMIM22K7EJ46 135 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 GRM6O15303 877 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 ZBTB14O43829 449 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 GRK2P25098 689 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 FMO4P31512 558 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 ESRRGP62508 458 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 SLC6A3Q01959 620 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 EEF1DP3Q658K8 133 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 KLHL35Q6PF15 583 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 LUZP2Q86TE4 346 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 PHYKPLQ8IUZ5 450 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 PPIL6Q8IXY8 311 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 ARL14EPQ8N8R7 260 aaPredicted RBP7.28□□□□□ -1.24
RAG1-201ENST00000299440 ZSWIM2Q8NEG5 633 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 MAGEC3Q8TD91 643 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 USP7Q93009 1102 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 MKL1Q969V6 931 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 MLPHQ9BV36 600 aaPredicted RBP7.28□□□□□ -1.24
RAG1-201ENST00000299440 TRMT61BQ9BVS5 477 aaKnown RBP7.28□□□□□ -1.24
RAG1-201ENST00000299440 OSBPL10Q9BXB5 764 aa7.28□□□□□ -1.24
RAG1-201ENST00000299440 NKX2-4Q9H2Z4 354 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms