RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SLC9A8Q9Y2E8 581 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 FAM92AA1XBS5 289 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 F8VZ95 297 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 INPP4BO15327 924 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 KCNQ2O43526 872 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CNPP09543 421 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 TSPAN19P0C672 248 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CASP4P49662 377 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ADARP55265 1226 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 C21orf59P57076 290 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CYP2R1Q6VVX0 501 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ZNF605Q86T29 641 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 PROSER1Q86XN7 944 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SAR1AQ9NR31 198 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 TDRKHQ9Y2W6 561 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 STARD13Q9Y3M8 1113 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 DUSP10Q9Y6W6 482 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CCDC182A6NF36 153 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SCARF1Q14162 830 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 PDK2Q15119 407 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 FAM98BQ52LJ0 330 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ZCCHC8Q6NZY4 707 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SLC20A1Q8WUM9 679 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 DDX20Q9UHI6 824 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 USP18Q9UMW8 372 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CHKBQ9Y259 395 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 RAD54BQ9Y620 910 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 GSAPA4D1B5 854 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SYNCRIPO60506 623 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CCNT2O60583 730 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 S100A6P06703 90 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 BAATQ14032 418 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 GATAD2AQ86YP4 633 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ZCCHC7Q8N3Z6 543 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CLHC1Q8NHS4 586 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 NSUN4Q96CB9 384 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MTFMTQ96DP5 389 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 FAM84BQ96KN1 310 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SLC9A7Q96T83 725 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 PAIP1Q9H074 479 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ARMC7Q9H6L4 198 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 GPN3Q9UHW5 284 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ERN1O75460 977 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MFN2O95140 757 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 GLP2RO95838 553 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 PAX7P23759 505 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 PIK3CBP42338 1070 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MAPKAPK2P49137 400 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ALDH9A1P49189 494 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 GEMP55040 296 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 EXOSC10Q01780 885 aaKnown RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ISLR2Q6UXK2 745 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 FAM43BQ6ZT52 329 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 NT5DC4Q86YG4 428 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SPPL2AQ8TCT8 520 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 HDAC7Q8WUI4 952 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 ADI1Q9BV57 179 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 GALNT8Q9NY28 637 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 UBP1Q9NZI7 540 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 BTBD3Q9Y2F9 522 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SPATA31A1Q5TZJ5 1347 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CNTNAP5Q8WYK1 1306 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 FGRP09769 529 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SLC2A4P14672 509 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 MUTP22033 750 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 PPP2R1BP30154 601 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CPT1AP50416 773 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CCNIQ14094 377 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 TKFCQ3LXA3 575 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 N4BP2L1Q5TBK1 243 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 C16orf86Q6ZW13 317 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 PTAR1Q7Z6K3 402 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SLITRK2Q9H156 845 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 EPB41L4AQ9HCS5 686 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SLC37A4O43826 429 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 OR6B1O95007 311 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 SLC11A2P49281 568 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 DHFR2Q86XF0 187 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CBWD2Q8IUF1 395 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CAPSLQ8WWF8 208 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 RPRD1AQ96P16 312 aaPredicted RBP5.68□□□□□ -1.5
CPSF2-201ENST00000298875 PRKAG3Q9UGI9 489 aa5.68□□□□□ -1.5
CPSF2-201ENST00000298875 CPA3P15088 417 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 NAA20P61599 178 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 ZNF543Q08ER8 600 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 MAD2L1Q13257 205 aaPredicted RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 RIPK1Q13546 671 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 GLRA4Q5JXX5 417 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 CLVS1Q8IUQ0 354 aaPredicted RBP5.67□□□□□ -1.5
CPSF2-201ENST00000298875 FAM172AQ8WUF8 416 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 MXRA8Q9BRK3 442 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 CCNB1IP1Q9NPC3 277 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 RAD51BO15315 384 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 CYP7B1O75881 506 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 CRTAMO95727 393 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 FXR2P51116 673 aaKnown RBP eCLIP5.67□□□□□ -1.53e-7■■■□□ 17.9
CPSF2-201ENST00000298875 COPZ1P61923 177 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 KCTD21Q4G0X4 260 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 PEX5LQ8IYB4 626 aa5.67□□□□□ -1.5
CPSF2-201ENST00000298875 CLYBLQ8N0X4 340 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms