RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 IGFBP6P24592 240 aaPredicted RBP25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 TYK2P29597 1187 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 CPOXP36551 454 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 SULT1E1P49888 294 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 CACNA2D1P54289 1103 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 ACTR3P61158 418 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 FOXB2Q5VYV0 432 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 SPATA13Q96N96 652 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 SETD4Q9NVD3 440 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 ZNF212Q9UDV6 495 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 WASHC5Q12768 1159 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 OR52E8Q6IFG1 317 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 RASSF3Q86WH2 238 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 RPS6KL1Q9Y6S9 549 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 SIN3BO75182 1162 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 DESP17661 470 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 ACAT1P24752 427 aaKnown RBP25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 TKTP29401 623 aaKnown RBP25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 SERPINB9P50453 376 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 PPP2R5DQ14738 602 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 NET1Q7Z628 596 aaPredicted RBP25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 PHTF2Q8N3S3 785 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 OR52K1Q8NGK4 314 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 FCRL3Q96P31 734 aaPredicted RBP25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 AGAP2Q99490 1192 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 SORT1Q99523 831 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 CACNG4Q9UBN1 327 aa25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 APOBEC2Q9Y235 224 aaKnown RBP25.07■■□□□ 1.6
SPTSSA-201ENST00000298130 SLC25A27O95847 323 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 ARL4AP40617 200 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 NIPAL4Q0D2K0 466 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 TCHHL1Q5QJ38 904 aaPredicted RBP25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 C6orf163Q5TEZ5 329 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 FAM91A1Q658Y4 838 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 LINC01465Q8N7H1 131 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 SLC16A10Q8TF71 515 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 C11orf84Q9BUA3 381 aaPredicted RBP25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 NDE1Q9NXR1 346 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 RGS17Q9UGC6 210 aaPredicted RBP25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 SCOCQ9UIL1 159 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 H3BRB1 525 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 BIRC5O15392 142 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 HOXA11P31270 313 aaPredicted RBP25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 BAG6P46379 1132 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 ADIGQ0VDE8 80 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 LPCAT4Q643R3 524 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 ISLR2Q6UXK2 745 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 MYLK4Q86YV6 388 aaPredicted RBP25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 SPNS2Q8IVW8 549 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 NLGN2Q8NFZ4 835 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 SLC26A7Q8TE54 656 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 OSMRQ99650 979 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 PRDM12Q9H4Q4 367 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 TUT1Q9H6E5 874 aaKnown RBP25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 MKS1Q9NXB0 559 aa25.06■■□□□ 1.6
SPTSSA-201ENST00000298130 BEST1O76090 585 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 GNAT1P11488 350 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 IDH3AP50213 366 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 MARCH8Q5T0T0 291 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 RNF111Q6ZNA4 994 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 TSC22D3Q99576 134 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 SOX13Q9UN79 622 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 DGKIO75912 1065 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 SAT1P21673 171 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 IRF9Q00978 393 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 CMPK2Q5EBM0 449 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 PID1Q7Z2X4 250 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 ZNF567Q8N184 647 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 ACVR1CQ8NER5 493 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 KBTBD7Q8WVZ9 684 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 C16orf70Q9BSU1 422 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.05■■□□□ 1.65e-8■□□□□ 9.6
SPTSSA-201ENST00000298130 CPSF2Q9P2I0 782 aaKnown RBP25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 TXNDC16Q9P2K2 825 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 ANGPTL2Q9UKU9 493 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 USP3Q9Y6I4 520 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 CITO14578 2027 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 LOC285556D6RIA3 1793 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 E9PBE3 544 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 KLHL41O60662 606 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 GNL1P36915 607 aaPredicted RBP25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 HIC1Q14526 733 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 RABGAP1LQ5R372 815 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 SYPL2Q5VXT5 272 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 KYAT3Q6YP21 454 aaKnown RBP25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 SLC26A9Q7LBE3 791 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 CATSPER4Q7RTX7 472 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 MAF1Q9H063 256 aa25.05■■□□□ 1.6
SPTSSA-201ENST00000298130 PTPRFP10586 1907 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 FAM72CH0Y354 149 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 AMHP03971 560 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 PTPN9P43378 593 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 SARNPP82979 210 aaKnown RBP25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 BST2Q10589 180 aaKnown RBP25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 TRMT5Q32P41 509 aaKnown RBP25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 DNAL1Q4LDG9 190 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 FAM72AQ5TYM5 149 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 FAM72DQ6L9T8 149 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 TAPT1Q6NXT6 567 aa25.04■■□□□ 1.6
SPTSSA-201ENST00000298130 ARCQ7LC44 396 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms