RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 TDRPQ86YL5 185 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 GUF1Q8N442 669 aaKnown RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 SAMD3Q8N6K7 520 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 MLPHQ9BV36 600 aaPredicted RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 TBC1D10AQ9BXI6 508 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.7□□□□□ -0.38
SLX4-201ENST00000294008 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 RBAK-RBAKDNI3L0D1 243 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 POU6F1Q14863 301 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 PTPN20Q4JDL3 420 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 ILDR2Q71H61 639 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 MPP5Q8N3R9 675 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 GRAMD1AQ96CP6 724 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 CALR3Q96L12 384 aaKnown RBP12.69□□□□□ -0.38
SLX4-201ENST00000294008 PTPN23Q9H3S7 1636 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 LIMD1Q9UGP4 676 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 LOC100506127A0A0U1RQW1 187 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 TMEM114B3SHH9 223 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 BTN3A3O00478 584 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 ATP9AO75110 1047 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 PDE5AO76074 875 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 COPAP53621 1224 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 PFKFB3Q16875 520 aaPredicted RBP12.69□□□□□ -0.38
SLX4-201ENST00000294008 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 FBXO16Q8IX29 292 aaPredicted RBP12.69□□□□□ -0.38
SLX4-201ENST00000294008 ADCY4Q8NFM4 1077 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 CATSPER2Q96P56 530 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 CORO1BQ9BR76 489 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 PDGFDQ9GZP0 370 aaPredicted RBP12.69□□□□□ -0.38
SLX4-201ENST00000294008 MROH7-TTC4A0A0A0MT08 1334 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 PHF20L1A8MW92 1017 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 KLHL41O60662 606 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 THP07101 528 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 IQSEC1Q6DN90 963 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 P4HA3Q7Z4N8 544 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 ITCHQ96J02 903 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 TMEM5Q9Y2B1 443 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 MTSS1O43312 755 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 TARSP26639 723 aaKnown RBP12.69□□□□□ -0.38
SLX4-201ENST00000294008 MTA1Q13330 715 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 DGLUCYQ7Z3D6 616 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 IL17REQ8NFR9 667 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 FAM111AQ96PZ2 611 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 L1RE1Q9UN81 338 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 NOX1Q9Y5S8 564 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 MLH3Q9UHC1 1453 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 KANSL1LA0AUZ9 987 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 LGALS16A8MUM7 142 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 MATN4O95460 622 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 NTRK1P04629 796 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 CASP4P49662 377 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 KBTBD12Q3ZCT8 623 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 KCNT1Q5JUK3 1230 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 FBXO38Q6PIJ6 1188 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 STRA8Q7Z7C7 330 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 CLEC10AQ8IUN9 316 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 ZKSCAN4Q969J2 545 aaPredicted RBP12.69□□□□□ -0.38
SLX4-201ENST00000294008 ATP6V1G3Q96LB4 118 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 ATP13A1Q9HD20 1204 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 RTN3O95197 1032 aaPredicted RBP12.69□□□□□ -0.38
SLX4-201ENST00000294008 TPH1P17752 444 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 MSX1P28360 303 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 AKR1D1P51857 326 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 SLC7A2P52569 658 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 PFKPQ01813 784 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 CYP2A13Q16696 494 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 ZNRF3Q9ULT6 936 aa12.69□□□□□ -0.38
SLX4-201ENST00000294008 OTOL1A6NHN0 477 aaPredicted RBP12.68□□□□□ -0.38
SLX4-201ENST00000294008 HBP1O60381 514 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 DGAT1O75907 488 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 EPHA7Q15375 998 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 SYT12Q8IV01 421 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 CHERPQ8IWX8 916 aaKnown RBP12.68□□□□□ -0.38
SLX4-201ENST00000294008 PARP8Q8N3A8 854 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 TTLL2Q9BWV7 592 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 C1QTNF1Q9BXJ1 281 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 PTGFRNQ9P2B2 879 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 MINPP1Q9UNW1 487 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 CCNA2P20248 432 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 GCLCP48506 637 aaPredicted RBP12.68□□□□□ -0.38
SLX4-201ENST00000294008 CDKL1Q00532 357 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 ELOAQ14241 798 aaKnown RBP12.68□□□□□ -0.38
SLX4-201ENST00000294008 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 PLEKHH3Q7Z736 793 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 LGI2Q8N0V4 545 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 C2orf73Q8N5S3 287 aaPredicted RBP12.68□□□□□ -0.38
SLX4-201ENST00000294008 CNPY3Q9BT09 278 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 C1orf232A0A0U1RR37 186 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 A0A0X1KG70 313 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 TRIM38O00635 465 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 COX7A2P14406 83 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 RAB25P57735 213 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 RAB11FIP2Q7L804 512 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 ZNF605Q86T29 641 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 PIGBQ92521 554 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 ULK1O75385 1050 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 FMO4P31512 558 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 FOXM1Q08050 763 aa12.68□□□□□ -0.38
SLX4-201ENST00000294008 NEDD8Q15843 81 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms