RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 OPLAHO14841 1288 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 RAD51BO15315 384 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 MAGEB2O15479 319 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 IL6P05231 212 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 CLTBP09497 229 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 GRK4P32298 578 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 RAD23AP54725 363 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 STX4Q12846 297 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 BOP1Q14137 746 aaKnown RBP16.46■□□□□ 0.23
SSRP1-202ENST00000293880 TSNQ15631 228 aaKnown RBP16.46■□□□□ 0.23
SSRP1-202ENST00000293880 PAPD7Q5XG87 772 aaKnown RBP16.46■□□□□ 0.23
SSRP1-202ENST00000293880 SLC25A24Q6NUK1 477 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 NPNTQ6UXI9 565 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 SAMD7Q7Z3H4 446 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 ACTR8Q9H981 624 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 NMRK1Q9NWW6 199 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 PCDHGA4Q9Y5G9 962 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 TBKBP1A7MCY6 615 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 TPP1O14773 563 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 CXCL8P10145 99 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 BOLA3Q53S33 107 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 CCDC80Q76M96 950 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 RNF44Q7L0R7 432 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 C3orf20Q8ND61 904 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 NYAP2Q9P242 653 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 TUBGCP4Q9UGJ1 667 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 ZNF112Q9UJU3 913 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 MYRFQ9Y2G1 1151 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 ACOT9Q9Y305 439 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 HBP1O60381 514 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 UMPSP11172 480 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 KRT20P35900 424 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 GUCA1AP43080 201 aaPredicted RBP16.46■□□□□ 0.23
SSRP1-202ENST00000293880 FAAP100Q0VG06 881 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 MYBPC2Q14324 1141 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 C16orf62Q7Z3J2 963 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 DMGDHQ9UI17 866 aaKnown RBP16.46■□□□□ 0.23
SSRP1-202ENST00000293880 INO80Q9ULG1 1556 aaPredicted RBP16.46■□□□□ 0.23
SSRP1-202ENST00000293880 USP42Q9H9J4 1324 aaKnown RBP16.46■□□□□ 0.23
SSRP1-202ENST00000293880 SMIM31A0A1B0GVY4 71 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 DCXO43602 365 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 FKBP6O75344 327 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 ALDH7A1P49419 539 aaKnown RBP16.46■□□□□ 0.23
SSRP1-202ENST00000293880 CPT1AP50416 773 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 TKTL1P51854 596 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 CRADDP78560 199 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 ZNF844Q08AG5 666 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 ERMARDQ5T6L9 678 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 MPZL3Q6UWV2 235 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 ZNF512BQ96KM6 892 aaPredicted RBP16.46■□□□□ 0.23
SSRP1-202ENST00000293880 SPACA6W5XKT8 324 aa16.46■□□□□ 0.23
SSRP1-202ENST00000293880 CRTAMO95727 393 aa16.46■□□□□ 0.22
SSRP1-202ENST00000293880 NUDT14O95848 222 aa16.46■□□□□ 0.22
SSRP1-202ENST00000293880 SHBGP04278 402 aa16.46■□□□□ 0.22
SSRP1-202ENST00000293880 ZSCAN5DPP0CG00 497 aa16.46■□□□□ 0.22
SSRP1-202ENST00000293880 VDRP11473 427 aa16.46■□□□□ 0.22
SSRP1-202ENST00000293880 CCDC130P13994 396 aa16.46■□□□□ 0.22
SSRP1-202ENST00000293880 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.46■□□□□ 0.22
SSRP1-202ENST00000293880 TMEM176AQ96HP8 235 aa16.46■□□□□ 0.22
SSRP1-202ENST00000293880 FRMD6Q96NE9 622 aa16.46■□□□□ 0.22
SSRP1-202ENST00000293880 SEMA4BQ9NPR2 832 aaPredicted RBP16.46■□□□□ 0.22
SSRP1-202ENST00000293880 CLTCL1P53675 1640 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 ADCY10Q96PN6 1610 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 SASH3O75995 380 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 ATP4AP20648 1035 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 AKAP5P24588 427 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 CYP24A1Q07973 514 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 GRTP1Q5TC63 336 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 MTSS1LQ765P7 747 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 A1CFQ9NQ94 594 aaKnown RBP16.45■□□□□ 0.22
SSRP1-202ENST00000293880 SNTG2Q9NY99 539 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 CRYL1Q9Y2S2 319 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 LYVE1Q9Y5Y7 322 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 UBAP2LQ14157 1087 aaKnown RBP16.45■□□□□ 0.22
SSRP1-202ENST00000293880 DGUOKQ16854 277 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 CGRRF1Q99675 332 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 TBL1YQ9BQ87 522 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 CISHQ9NSE2 258 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 PRKAG3Q9UGI9 489 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 VPS9D1Q9Y2B5 631 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 MROH7Q68CQ1 1323 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 CROCC2H7BZ55 1655 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 TMEM150BA6NC51 233 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 HLA-DQA2P01906 255 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 PROCP04070 461 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 GRK3P35626 688 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 CBWD3Q5JTY5 395 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 CBWD5Q5RIA9 395 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 HACL1Q9UJ83 578 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 AMPD1P23109 780 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 CAVIN3Q969G5 261 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 APOPT1Q96IL0 206 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 NCKIPSDQ9NZQ3 722 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 CLTCQ00610 1675 aaKnown RBP16.45■□□□□ 0.22
SSRP1-202ENST00000293880 E7ENQ6 273 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 MRASO14807 208 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 B3GAT3O94766 335 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 PCDH8O95206 1070 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 CKBP12277 381 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 ETS2P15036 469 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms