RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 SMARCD1Q96GM5 515 aa20.56■□□□□ 0.88
CXCL16-201ENST00000293778 KANSL3Q9P2N6 904 aa20.56■□□□□ 0.88
CXCL16-201ENST00000293778 STK38LQ9Y2H1 464 aa20.56■□□□□ 0.88
CXCL16-201ENST00000293778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 HHLA1C9JL84 531 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 KLF11O14901 512 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 ALDH1A2O94788 518 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 CYBAP13498 195 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 UPP1Q16831 310 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 TIGD5Q53EQ6 642 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 SPDYAQ5MJ70 313 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 SWT1Q5T5J6 900 aaKnown RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 BSPRYQ5W0U4 402 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 CTU1Q7Z7A3 348 aaKnown RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 MRPL10Q7Z7H8 261 aaKnown RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 CCNJLQ8IV13 435 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 UNC5BQ8IZJ1 945 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 PGAP3Q96FM1 320 aaPredicted RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 AGO3Q9H9G7 860 aaKnown RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 PCMTD2Q9NV79 361 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 PIH1D1Q9NWS0 290 aaKnown RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 IGSF9Q9P2J2 1179 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 ZFP69BQ9UJL9 534 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 ZNF638Q14966 1978 aaKnown RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 SCN10AQ9Y5Y9 1956 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 A0A0G2JND7 137 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 I6L893 689 aaPredicted RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 TGDSO95455 350 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 IL1BP01584 269 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 PGAM1P18669 254 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 CNTFP26441 200 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 MGAT3Q09327 533 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 CRHR2Q13324 411 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 ARL13BQ3SXY8 428 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 TAF1BQ53T94 588 aaPredicted RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 RGMBQ6NW40 437 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 MARK2Q7KZI7 788 aaKnown RBP20.55■□□□□ 0.88
CXCL16-201ENST00000293778 PID1Q7Z2X4 250 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 NDUFAF2Q8N183 169 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 PGBD4Q96DM1 585 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 RHOBTB2Q9BYZ6 727 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 LRMDAQ9H2I8 198 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 SPC25Q9HBM1 224 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 RRN3Q9NYV6 651 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 HAO1Q9UJM8 370 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 RAD54BQ9Y620 910 aa20.55■□□□□ 0.88
CXCL16-201ENST00000293778 KCNK1O00180 336 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 ZNF189O75820 626 aaPredicted RBP20.54■□□□□ 0.88
CXCL16-201ENST00000293778 AMHP03971 560 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 HCAR3P49019 387 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 MTDHQ86UE4 582 aaKnown RBP20.54■□□□□ 0.88
CXCL16-201ENST00000293778 TRIM42Q8IWZ5 723 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 PLCD3Q8N3E9 789 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 ARMC2Q8NEN0 867 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 ARNTL2Q8WYA1 636 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 MYLPFQ96A32 169 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 KLHL8Q9P2G9 620 aaPredicted RBP20.54■□□□□ 0.88
CXCL16-201ENST00000293778 I3L4J1 428 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 ODC1P11926 461 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 SLC8A1P32418 973 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 TIFABQ6ZNK6 161 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 EDEM1Q92611 657 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 CDKL2Q92772 493 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 RAB3IPQ96QF0 476 aaPredicted RBP20.54■□□□□ 0.88
CXCL16-201ENST00000293778 NAT9Q9BTE0 207 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 COLEC11Q9BWP8 271 aa20.54■□□□□ 0.88
CXCL16-201ENST00000293778 UPF3AQ9H1J1 476 aaKnown RBP20.54■□□□□ 0.88
CXCL16-201ENST00000293778 F9P00740 461 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 T-ENOLP0DO92 83 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 CRHR1P34998 444 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 ARFIP2P53365 341 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 INHBEP58166 350 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 NIPAL4Q0D2K0 466 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 CRYMQ14894 314 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 MFSD14CQ5VZR4 134 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 ZNF449Q6P9G9 518 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 BHLHA9Q7RTU4 235 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 INPP5DQ92835 1189 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 TMEM237Q96Q45 408 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 RTP3Q9BQQ7 232 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 MECRQ9BV79 373 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 CSNK1G1Q9HCP0 422 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 SYBUQ9NX95 663 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 NCAM2O15394 837 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 IBSPP21815 317 aaPredicted RBP20.53■□□□□ 0.88
CXCL16-201ENST00000293778 PTPN3P26045 913 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 CD52P31358 61 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 CLNKQ7Z7G1 428 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 RPAINQ86UA6 219 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 TRIB2Q92519 343 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 TMEM120AQ9BXJ8 343 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 PADI3Q9ULW8 664 aa20.53■□□□□ 0.88
CXCL16-201ENST00000293778 POMCP01189 267 aa20.52■□□□□ 0.88
CXCL16-201ENST00000293778 THPOP40225 353 aa20.52■□□□□ 0.88
CXCL16-201ENST00000293778 PAN2Q504Q3 1202 aaKnown RBP20.52■□□□□ 0.88
CXCL16-201ENST00000293778 METTL23Q86XA0 190 aa20.52■□□□□ 0.88
CXCL16-201ENST00000293778 CEP57Q86XR8 500 aa20.52■□□□□ 0.88
CXCL16-201ENST00000293778 WDCPQ9H6R7 721 aa20.52■□□□□ 0.88
CXCL16-201ENST00000293778 KCNK13Q9HB14 408 aa20.52■□□□□ 0.88
CXCL16-201ENST00000293778 SLC17A6Q9P2U8 582 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms