RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ADIPOR2Q86V24 386 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 RASSF3Q86WH2 238 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 ERICH1Q86X53 443 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 UNC45BQ8IWX7 931 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 TTC16Q8NEE8 873 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 SYN2Q92777 582 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-201ENST00000288344 PRICKLE1Q96MT3 831 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-201ENST00000288344 SERPINB11Q96P15 392 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 BBS2Q9BXC9 721 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 FAM126AQ9BYI3 521 aaPredicted RBP9.52□□□□□ -0.89
HMGN1-201ENST00000288344 SLC2A11Q9BYW1 496 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 NACA2Q9H009 215 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 ARHGEF4Q9NR80 690 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.52□□□□□ -0.89
HMGN1-201ENST00000288344 ARHGEF38Q9NXL2 777 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 TAS2R14Q9NYV8 317 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 PLK2Q9NYY3 685 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 DEC1Q9P2X7 70 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 EBF1Q9UH73 591 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 FKBPLQ9UIM3 349 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 LSM7Q9UK45 103 aaKnown RBP9.52□□□□□ -0.89
HMGN1-201ENST00000288344 CAPN11Q9UMQ6 739 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 DOCK4Q8N1I0 1966 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 ABCA7Q8IZY2 2146 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 A0A1W2PQF6 199 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 C2CD4BA6NLJ0 364 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 LRRC53A6NM62 1247 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-201ENST00000288344 SGK1O00141 431 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 DDX3XO00571 662 aaKnown RBP eCLIP9.51□□□□□ -0.898e-16■■■□□ 16.4
HMGN1-201ENST00000288344 LAMTOR5O43504 91 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 GRAP2O75791 330 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 GYPCP04921 128 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 FERP16591 822 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 HLA-FP30511 346 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 HARS2P49590 506 aaKnown RBP9.51□□□□□ -0.89
HMGN1-201ENST00000288344 UBASH3AP57075 661 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 CSTF1Q05048 431 aaKnown RBP9.51□□□□□ -0.89
HMGN1-201ENST00000288344 CRY1Q16526 586 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 SLC25A52Q3SY17 297 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 HSF5Q4G112 596 aaPredicted RBP9.51□□□□□ -0.89
HMGN1-201ENST00000288344 RAB6CQ53S08 254 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 MS4A13Q5J8X5 152 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 NUGGCQ68CJ6 796 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 OR6B2Q6IFH4 312 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 ACAD10Q6JQN1 1059 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 RFWD3Q6PCD5 774 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 WDR59Q6PJI9 974 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 ASCL5Q7RTU5 278 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 GAS2L3Q86XJ1 694 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 CAMKK1Q8N5S9 505 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 RPLP0P6Q8NHW5 317 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 FAM149B1Q96BN6 582 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 TMA16Q96EY4 203 aaKnown RBP9.51□□□□□ -0.89
HMGN1-201ENST00000288344 ALG14Q96F25 216 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 NOX5Q96PH1 765 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 SPAG5Q96R06 1193 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 ACOX2Q99424 681 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 SPSB2Q99619 263 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 GABRG3Q99928 467 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 TRIM62Q9BVG3 475 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 RAB6CQ9H0N0 254 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 NUCKS1Q9H1E3 243 aaKnown RBP9.51□□□□□ -0.89
HMGN1-201ENST00000288344 ISCUQ9H1K1 167 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 PRDM9Q9NQV7 894 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 PIGVQ9NUD9 493 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 FAM86C1Q9NVL1 165 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 ZSCAN32Q9NX65 697 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 IFNKQ9P0W0 207 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 ZNF212Q9UDV6 495 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 INTS6Q9UL03 887 aaKnown RBP9.51□□□□□ -0.89
HMGN1-201ENST00000288344 MMP17Q9ULZ9 603 aa9.51□□□□□ -0.89
HMGN1-201ENST00000288344 CHD5Q8TDI0 1954 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 GON4LQ3T8J9 2241 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 ITIH6Q6UXX5 1313 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 IGLV3-10A0A075B6K4 115 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 DRGXA6NNA5 263 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 NEDD8-MDP1E9PL57 170 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 ATG13O75143 517 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 ADCY5O95622 1261 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 APODP05090 189 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 GZMAP12544 262 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 TGM1P22735 817 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 RFC1P35251 1148 aaPredicted RBP9.5□□□□□ -0.89
HMGN1-201ENST00000288344 ATXN1P54253 815 aaKnown RBP9.5□□□□□ -0.89
HMGN1-201ENST00000288344 ASTE1Q2TB18 679 aaPredicted RBP9.5□□□□□ -0.89
HMGN1-201ENST00000288344 ANO4Q32M45 955 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 CCDC14Q49A88 953 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 FILIP1LQ4L180 1135 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 MPPE1Q53F39 396 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 FSCBQ5H9T9 825 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 SH3PXD2AQ5TCZ1 1133 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 MMS22LQ6ZRQ5 1243 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 WDR5BQ86VZ2 330 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 ARFGAP1Q8N6T3 406 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 JOSD2Q8TAC2 188 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 FIBINQ8TAL6 211 aa9.5□□□□□ -0.89
HMGN1-201ENST00000288344 ATOH1Q92858 354 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms