RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ABCB8Q9NUT2 735 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 POLR3BQ9NW08 1133 aaPredicted RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 DLGAP2Q9P1A6 1054 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 CALCOCO1Q9P1Z2 691 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 BCCIPQ9P287 314 aaKnown RBP eCLIP6.76□□□□□ -1.33
CD44-204ENST00000279452 ARHGAP20Q9P2F6 1191 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 GGA2Q9UJY4 613 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 CLEC4EQ9ULY5 219 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 SNX10Q9Y5X0 201 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 HS3ST4Q9Y661 456 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 KIF26AQ9ULI4 1882 aaPredicted RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 ZNF638Q14966 1978 aaKnown RBP6.76□□□□□ -1.33
CD44-204ENST00000279452 C5orf42Q9H799 3197 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 DENND4CQ5VZ89 1909 aa6.76□□□□□ -1.33
CD44-204ENST00000279452 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 A0A1B0GVM2 712 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 ANTXRLA6NF34 631 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 TCAF2A6NFQ2 919 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 TMEM110-MUSTN1A8MSY1 372 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 K7EQS6 105 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 RNF8O76064 485 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 LUC7L3O95232 432 aaKnown RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 IPO7O95373 1038 aaKnown RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 MOCS3O95396 460 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 PABPC1P11940 636 aaKnown RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 GZMAP12544 262 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 HLA-FP30511 346 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 CD70P32970 193 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 GJC1P36383 396 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 PTPN9P43378 593 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 TNFRSF4P43489 277 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 PXNP49023 591 aaPredicted RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 CXCR3P49682 368 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 ZNF143P52747 638 aaPredicted RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 GSCP56915 257 aaPredicted RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 MRPS21P82921 87 aaKnown RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 ZNF177Q13360 481 aaPredicted RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 FZD5Q13467 585 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 MAMLD1Q13495 774 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 AUHQ13825 339 aaKnown RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 GAS6Q14393 721 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 DMC1Q14565 340 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 GEN1Q17RS7 908 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 FNDC3BQ53EP0 1204 aaKnown RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 RAB6CQ53S08 254 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 EFHC2Q5JST6 749 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 EOGTQ5NDL2 527 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 TTC39BQ5VTQ0 682 aaPredicted RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 RNF219Q5W0B1 726 aaPredicted RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 EGFLAMQ63HQ2 1017 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 ANO7Q6IWH7 933 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 RWDD4Q6NW29 188 aaKnown RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 FBXL22Q6P050 247 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 ZC3H14Q6PJT7 736 aaKnown RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 ARCQ7LC44 396 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 STRADAQ7RTN6 431 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 TFAP2DQ7Z6R9 452 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 ZNF354CQ86Y25 554 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 CACUL1Q86Y37 369 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 AHI1Q8N157 1196 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 ZNF687Q8N1G0 1237 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 CCDC185Q8N715 623 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 TXNDC5Q8NBS9 432 aaKnown RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 OLIG1Q8TAK6 271 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 USP33Q8TEY7 942 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 ATRIPQ8WXE1 791 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 AZIN2Q96A70 460 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 MYEOVQ96EZ4 313 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 PGAP3Q96FM1 320 aaPredicted RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 MRFAP1L1Q96HT8 127 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 VCPIP1Q96JH7 1222 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 CNPY3Q9BT09 278 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 NUP85Q9BW27 656 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 SLC2A11Q9BYW1 496 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 ADAM33Q9BZ11 813 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 RAB6CQ9H0N0 254 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 THAP2Q9H0W7 228 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 MUC3BQ9H195 1237 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 IRF2BPLQ9H1B7 796 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 NHEJ1Q9H9Q4 299 aaPredicted RBP6.75□□□□□ -1.33
CD44-204ENST00000279452 SPTLC3Q9NUV7 552 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 ARHGEF38Q9NXL2 777 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 CACNA2D2Q9NY47 1150 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 CTTNBP2NLQ9P2B4 639 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 ANAPC7Q9UJX3 599 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 STOML2Q9UJZ1 356 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 R4GN57 208 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 KMT2EQ8IZD2 1858 aa6.75□□□□□ -1.33
CD44-204ENST00000279452 TECTAO75443 2155 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 TCRBV21S2A2A0A5A6 115 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 CHURC1-FNTBB4DL54 471 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 PRRT4C9JH25 899 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 E9PAM4 449 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 SGK1O00141 431 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 CREB3O43889 395 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 PRPSAP2O60256 369 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 SYNCRIPO60506 623 aaKnown RBP6.74□□□□□ -1.33
CD44-204ENST00000279452 ALDH1A2O94788 518 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 APBB3O95704 486 aa6.74□□□□□ -1.33
CD44-204ENST00000279452 ATP5BP06576 529 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms