RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 LRRN4Q8WUT4 740 aa20.77■□□□□ 0.92
CACNA1B-201ENST00000277549 C10orf88Q9H8K7 445 aa20.77■□□□□ 0.92
CACNA1B-201ENST00000277549 MAPK11Q15759 364 aa20.77■□□□□ 0.91
CACNA1B-201ENST00000277549 SLC45A4Q5BKX6 768 aa20.77■□□□□ 0.91
CACNA1B-201ENST00000277549 SEL1L3Q68CR1 1132 aa20.77■□□□□ 0.91
CACNA1B-201ENST00000277549 SERPINA13PQ6UXR4 307 aa20.77■□□□□ 0.91
CACNA1B-201ENST00000277549 BPIFA3Q9BQP9 254 aa20.77■□□□□ 0.91
CACNA1B-201ENST00000277549 CHKBQ9Y259 395 aa20.77■□□□□ 0.91
CACNA1B-201ENST00000277549 ANGPT4Q9Y264 503 aa20.77■□□□□ 0.91
CACNA1B-201ENST00000277549 NT5C1B-RDH14C9J2C7 533 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 FOXN3O00409 490 aaPredicted RBP20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 NAMPTP43490 491 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 CDH8P55286 799 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 BST2Q10589 180 aaKnown RBP20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 ZC3H7AQ8IWR0 971 aaKnown RBP20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 C1QTNF7Q9BXJ2 289 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 CARD9Q9H257 536 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 VPS4BO75351 444 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 RPL4P36578 427 aaKnown RBP20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 CENPCQ03188 943 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 MILR1Q7Z6M3 343 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 ANKEF1Q9NU02 776 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 GLRA3O75311 464 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 AMPD1P23109 780 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 ARMCX4Q5H9R4 360 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 DAB2IPQ5VWQ8 1189 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 EXOC2Q96KP1 924 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 COG5Q9UP83 839 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 A0A0B4J269 797 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 ABCG1P45844 678 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 ADSSL1Q8N142 457 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 AGBL3Q8NEM8 1001 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 MKNK1Q9BUB5 465 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 PHTF1Q9UMS5 762 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 FAM50BQ9Y247 325 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 A0A1W2PQC6 194 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 CNOT3O75175 753 aaKnown RBP20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 ALX1Q15699 326 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 GPR141Q7Z602 305 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 TM6SF2Q9BZW4 377 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 MGAT1P26572 445 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 FXR1P51114 621 aaKnown RBP eCLIP20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 ABRQ12979 859 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 DDR2Q16832 855 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 ZNF671Q8TAW3 534 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 RIT2Q99578 217 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 KANSL3Q9P2N6 904 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 IQSEC2Q5JU85 1478 aa20.76■□□□□ 0.91
CACNA1B-201ENST00000277549 RAD51BO15315 384 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 ADSLP30566 484 aaPredicted RBP20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 MTAPQ13126 283 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 FAM45BPQ6NSW5 357 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 RERGQ96A58 199 aaPredicted RBP20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 KCNS3Q9BQ31 491 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 SPATA31A1Q5TZJ5 1347 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 PABPC1P11940 636 aaKnown RBP20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 ALAS2P22557 587 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 AQP5P55064 265 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 SYT12Q8IV01 421 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 GPR156Q8NFN8 814 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 IGDCC4Q8TDY8 1250 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 SLC4A9Q96Q91 983 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 APBA2Q99767 749 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 LRRC40Q9H9A6 602 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 CISHQ9NSE2 258 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 ZNF862O60290 1169 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 POLD2P49005 469 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 SRP54P61011 504 aaKnown RBP20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 COPZ1P61923 177 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 TCHHL1Q5QJ38 904 aaPredicted RBP20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 TMED8Q6PL24 325 aaPredicted RBP20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 CRTC3Q6UUV7 619 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 ALLCQ8N6M5 410 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 SPATC1LQ9H0A9 340 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 SLITRK2Q9H156 845 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 TBC1D13Q9NVG8 400 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 KCND2Q9NZV8 630 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 CCDC154A6NI56 674 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 ERMARDQ5T6L9 678 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 PIGKQ92643 395 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 TBL1YQ9BQ87 522 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 TNKS2Q9H2K2 1166 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 KIF1BO60333 1816 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 TRAV19A0A0A6YYK7 116 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 ISM1B1AKI9 464 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 FAM86B1E9PN63 330 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 FFAR2O15552 330 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 COX7A2P14406 83 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 ABL2P42684 1182 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 TFDP3Q5H9I0 405 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 RAP1GAP2Q684P5 730 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 PMEPA1Q969W9 287 aa20.75■□□□□ 0.91
CACNA1B-201ENST00000277549 RHOBTB3O94955 611 aa20.74■□□□□ 0.91
CACNA1B-201ENST00000277549 PSEN2P49810 448 aa20.74■□□□□ 0.91
CACNA1B-201ENST00000277549 GINS4Q9BRT9 223 aa20.74■□□□□ 0.91
CACNA1B-201ENST00000277549 POLR1BQ9H9Y6 1135 aa20.74■□□□□ 0.91
CACNA1B-201ENST00000277549 EFR3BQ9Y2G0 817 aa20.74■□□□□ 0.91
CACNA1B-201ENST00000277549 GJB6O95452 261 aa20.74■□□□□ 0.91
CACNA1B-201ENST00000277549 HERVK_113P62684 666 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms