RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 HIF1AQ16665 826 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 EMC10Q5UCC4 262 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 ANKMY2Q8IV38 441 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 ZBED8Q8IZ13 594 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 TMEM199Q8N511 208 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 FAM76AQ8TAV0 307 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 CEP41Q9BYV8 373 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 PHACTR1Q9C0D0 580 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 CLIC5Q9NZA1 410 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 NUP205Q92621 2012 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 SLCO1A2P46721 670 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 SPOUT1Q5T280 376 aaKnown RBP12.49□□□□□ -0.41
SDE2-201ENST00000272091 CAND1Q86VP6 1230 aaKnown RBP12.49□□□□□ -0.41
SDE2-201ENST00000272091 ARHGAP18Q8N392 663 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 ZSCAN18Q8TBC5 510 aaPredicted RBP12.49□□□□□ -0.41
SDE2-201ENST00000272091 DEPDC1BQ8WUY9 529 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 SERPINB11Q96P15 392 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 SIK2Q9H0K1 926 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 CCSER2Q9H7U1 834 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 NDFIP2Q9NV92 336 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 EURLQ9NYK6 297 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 CTNNAL1Q9UBT7 734 aa12.49□□□□□ -0.41
SDE2-201ENST00000272091 AVILO75366 819 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 IGLV3-27P01718 113 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 ABHD2P08910 425 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 EN2P19622 333 aaPredicted RBP12.48□□□□□ -0.41
SDE2-201ENST00000272091 EPHB2P29323 1055 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 IRAK1P51617 712 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 GALNT2Q10471 571 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 DNAJC21Q5F1R6 531 aaKnown RBP12.48□□□□□ -0.41
SDE2-201ENST00000272091 ANKRD20A2Q5SQ80 823 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 ANKRD20A1Q5TYW2 823 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 ANKRD20A3Q5VUR7 823 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 HEATR6Q6AI08 1181 aaKnown RBP12.48□□□□□ -0.41
SDE2-201ENST00000272091 DDX53Q86TM3 631 aaKnown RBP12.48□□□□□ -0.41
SDE2-201ENST00000272091 ARHGAP12Q8IWW6 846 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 EPAS1Q99814 870 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 COMMD8Q9NX08 183 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 SMIM23A6NLE4 172 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 BAIAP3O94812 1187 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 SRGAP2BP0DMP2 458 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 HMGA1P17096 107 aaKnown RBP12.48□□□□□ -0.41
SDE2-201ENST00000272091 IFI35P80217 286 aaPredicted RBP12.48□□□□□ -0.41
SDE2-201ENST00000272091 AP1B1Q10567 949 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 EFEMP1Q12805 493 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 EXOC4Q96A65 974 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 PGM2Q96G03 612 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 PLAC1Q9HBJ0 212 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 NOVA2Q9UNW9 492 aaKnown RBP12.48□□□□□ -0.41
SDE2-201ENST00000272091 A0A0A0MRY4 1105 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 RNF103O00237 685 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 NDC80O14777 642 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 LAG3P18627 525 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 ZNF135P52742 658 aaPredicted RBP12.48□□□□□ -0.41
SDE2-201ENST00000272091 PPIDQ08752 370 aaKnown RBP12.48□□□□□ -0.41
SDE2-201ENST00000272091 PDK1Q15118 436 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 CENPUQ71F23 418 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 SPATA13Q96N96 652 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 SERPINB12Q96P63 405 aa12.48□□□□□ -0.41
SDE2-201ENST00000272091 AFF4Q9UHB7 1163 aaKnown RBP12.48□□□□□ -0.41
SDE2-201ENST00000272091 TCEA3O75764 348 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 MOCS2O96007 188 aaPredicted RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 ARL4CP56559 192 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 RPL10AP62906 217 aaKnown RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 SKOR1P84550 965 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 NRG1Q02297 640 aaPredicted RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 KDM7AQ6ZMT4 941 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 ARHGAP36Q6ZRI8 547 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 ZNF567Q8N184 647 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 TLR8Q9NR97 1041 aaKnown RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 RAD54BQ9Y620 910 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 FOXO6A8MYZ6 492 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 F5H423 210 aaPredicted RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 LILRB3O75022 631 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 MAGEA3P43357 314 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 SEMA5AQ13591 1074 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 BZW1Q7L1Q6 419 aaKnown RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 ZNF461Q8TAF7 563 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 ZNF419Q96HQ0 510 aaPredicted RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 CELF6Q96J87 481 aaKnown RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 SPG21Q9NZD8 308 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 CXXC1Q9P0U4 656 aaPredicted RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 E9PAM4 449 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 SMAPO00193 183 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 EFCAB14O75071 495 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 NR1D1P20393 614 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 PTPN3P26045 913 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 TBX4P57082 545 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 AFMIDQ63HM1 303 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 FBXO36Q8NEA4 188 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 HDAC11Q96DB2 347 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 MYEOVQ96EZ4 313 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 TMEM169Q96HH4 297 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
SDE2-201ENST00000272091 BCCIPQ9P287 314 aaKnown RBP eCLIP12.47□□□□□ -0.41
SDE2-201ENST00000272091 MAGED2Q9UNF1 606 aaPredicted RBP12.47□□□□□ -0.41
SDE2-201ENST00000272091 TLDC2A0PJX2 215 aa12.46□□□□□ -0.41
SDE2-201ENST00000272091 GOLGA6L10A6NI86 522 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms