RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 MTF2Q9Y483 593 aaPredicted RBP25.51■■□□□ 1.67
SSBP4-201ENST00000270061 TRUB2O95900 331 aaKnown RBP25.5■■□□□ 1.67
SSBP4-201ENST00000270061 USP17L7P0C7H9 530 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 MYBL2P10244 700 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 GLULP15104 373 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 DESP17661 470 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 IL1R2P27930 398 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 SDC4P31431 198 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 PTPN9P43378 593 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 PPP3CCP48454 512 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 DR1Q01658 176 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 AENQ8WTP8 325 aaKnown RBP25.5■■□□□ 1.67
SSBP4-201ENST00000270061 RNF25Q96BH1 459 aaPredicted RBP25.5■■□□□ 1.67
SSBP4-201ENST00000270061 CYP2S1Q96SQ9 504 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 HERPUD2Q9BSE4 406 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 CSNK1G1Q9HCP0 422 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 USP18Q9UMW8 372 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 PATJQ8NI35 1801 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 USP34Q70CQ2 3546 aa25.5■■□□□ 1.67
SSBP4-201ENST00000270061 C2orf78A6NCI8 922 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 TTI1O43156 1089 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 GRAP2O75791 330 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 RTN3O95197 1032 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-201ENST00000270061 TARSP26639 723 aaKnown RBP25.49■■□□□ 1.67
SSBP4-201ENST00000270061 COILP38432 576 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-201ENST00000270061 MFSD7Q6UXD7 560 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 SPOCD1Q6ZMY3 1216 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 ARL14EPQ8N8R7 260 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-201ENST00000270061 RAPGEF5Q92565 580 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 SLC22A12Q96S37 553 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 SMOQ99835 787 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 FUT8Q9BYC5 575 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 MYO16Q9Y6X6 1858 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 SHISA7A6NL88 538 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 NCAM2O15394 837 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 HDCP19113 662 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 PTGIRP43119 386 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 KPNA1P52294 538 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-201ENST00000270061 MLLT6P55198 1093 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-201ENST00000270061 MAP3K7CLP57077 242 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 TAF10Q12962 218 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 CUL1Q13616 776 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 TAZQ16635 292 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 ODF2Q5BJF6 829 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 CCDC137Q6PK04 289 aaKnown RBP25.49■■□□□ 1.67
SSBP4-201ENST00000270061 ANKS1BQ7Z6G8 1248 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 CLEC4CQ8WTT0 213 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 CASKIN2Q8WXE0 1202 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 ATOH1Q92858 354 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-201ENST00000270061 SLCO2A1Q92959 643 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 HINFPQ9BQA5 517 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 RAB17Q9H0T7 212 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 LRRC4Q9HBW1 653 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 GTSE1Q9NYZ3 720 aa25.49■■□□□ 1.67
SSBP4-201ENST00000270061 ZSCAN5CA6NGD5 496 aaPredicted RBP25.48■■□□□ 1.67
SSBP4-201ENST00000270061 C3orf70A6NLC5 250 aaPredicted RBP25.48■■□□□ 1.67
SSBP4-201ENST00000270061 FBXO21O94952 628 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 YWHAQP27348 245 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 CDKN2BP42772 138 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 ANGPT1Q15389 498 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 TFDP3Q5H9I0 405 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 RAB41Q5JT25 222 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 ZFYVE27Q5T4F4 411 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 TTC27Q6P3X3 843 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 ZMIZ2Q8NF64 920 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 FAM3CQ92520 227 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 CENPIQ92674 756 aaPredicted RBP25.48■■□□□ 1.67
SSBP4-201ENST00000270061 MSANTD3Q96H12 275 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 CFAP57Q96MR6 1250 aa25.48■■□□□ 1.67
SSBP4-201ENST00000270061 UTP11Q9Y3A2 253 aaKnown RBP25.48■■□□□ 1.67
SSBP4-201ENST00000270061 ZNF840PA6NDX5 716 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 MAP2K7O14733 419 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 HSF2BPO75031 334 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 TJP3O95049 919 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 PFKLP17858 780 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 SLC5A3P53794 718 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 ADIGQ0VDE8 80 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 CCNG2Q16589 344 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 C15orf59Q2T9L4 293 aaPredicted RBP25.47■■□□□ 1.67
SSBP4-201ENST00000270061 HDXQ7Z353 690 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 HEMGNQ9BXL5 484 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 DCLK3Q9C098 648 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 C8orf33Q9H7E9 229 aaPredicted RBP25.47■■□□□ 1.67
SSBP4-201ENST00000270061 ZWILCHQ9H900 591 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 GKN1Q9NS71 199 aa25.47■■□□□ 1.67
SSBP4-201ENST00000270061 NDRG2Q9UN36 371 aaKnown RBP25.47■■□□□ 1.67
SSBP4-201ENST00000270061 hCG_1818297A0A087WSY0 165 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 LRRD1A4D1F6 860 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 KDELR1P24390 212 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 CARSP49589 748 aaKnown RBP25.46■■□□□ 1.67
SSBP4-201ENST00000270061 DRG2P55039 364 aaKnown RBP25.46■■□□□ 1.67
SSBP4-201ENST00000270061 TNK2Q07912 1038 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 SH3PXD2AQ5TCZ1 1133 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 EMBQ6PCB8 327 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 C1orf228Q6PIY5 440 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 TTC16Q8NEE8 873 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 PDZD8Q8NEN9 1154 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 SCAMP5Q8TAC9 235 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 FBXO32Q969P5 355 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 KLHL11Q9NVR0 708 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms