RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PCDHGB4Q9UN71 923 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 PCDHGB5Q9Y5G0 923 aa28.25■■■□□ 2.11
CBX4-201ENST00000269397 PAPSS1O43252 624 aaPredicted RBP28.24■■■□□ 2.11
CBX4-201ENST00000269397 COX4I1P13073 169 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 SLC9B1Q4ZJI4 515 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 CDKL2Q92772 493 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 DTLQ9NZJ0 730 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 EVPLQ92817 2033 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 SOWAHBA6NEL2 793 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 PABPC4LP0CB38 370 aaKnown RBP28.24■■■□□ 2.11
CBX4-201ENST00000269397 IGBP1P78318 339 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 SLC6A3Q01959 620 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 EFCAB12Q6NXP0 572 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 CCDC28BQ9BUN5 200 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 STN1Q9H668 368 aaKnown RBP28.24■■■□□ 2.11
CBX4-201ENST00000269397 HESX1Q9UBX0 185 aa28.24■■■□□ 2.11
CBX4-201ENST00000269397 DPEP1P16444 411 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 METTL7BQ6UX53 244 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 PLD6Q8N2A8 252 aaKnown RBP28.23■■■□□ 2.11
CBX4-201ENST00000269397 COLGALT1Q8NBJ5 622 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 ICA1LQ8NDH6 482 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 MAPK15Q8TD08 544 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 ARNTL2Q8WYA1 636 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 JADE3Q92613 823 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 NT5C1AQ9BXI3 368 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 R3HDMLQ9H3Y0 253 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 CYP3A43Q9HB55 503 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 SEPT10Q9P0V9 454 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 GOLGA8QA0A0J9YX86 632 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 GOLGA8OA6NCC3 632 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 GOLGA8NF8WBI6 632 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 NOP56O00567 594 aaKnown RBP28.23■■■□□ 2.11
CBX4-201ENST00000269397 MDM4O15151 490 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 ALDH1A2O94788 518 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 SERPINB5P36952 375 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 SLC10A6Q3KNW5 377 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 NAPRTQ6XQN6 538 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 SPATA24Q86W54 205 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 CCDC185Q8N715 623 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 ACMSDQ8TDX5 336 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 QKIQ96PU8 341 aaKnown RBP eCLIP28.23■■■□□ 2.11
CBX4-201ENST00000269397 HAPLN3Q96S86 360 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 SYBUQ9NX95 663 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 TNFSF13BQ9Y275 285 aa28.23■■■□□ 2.11
CBX4-201ENST00000269397 P4HA1P13674 534 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 GRM2Q14416 872 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 ANKRD20A4Q4UJ75 823 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 STXBP5Q5T5C0 1151 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 UGT2A3Q6UWM9 527 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 HTR3CQ8WXA8 447 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 CSPG4P5Q96PW8 444 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 KCTD15Q96SI1 283 aaPredicted RBP28.22■■■□□ 2.11
CBX4-201ENST00000269397 TBCBQ99426 244 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 HOXC10Q9NYD6 342 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 AP4E1Q9UPM8 1137 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 COMMD3-BMI1R4GMX3 469 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 C15orf38-AP3S2A0A0A6YYH1 394 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 IGKV6-21A0A0C4DH24 114 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 AIM2O14862 343 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 GOT1P17174 413 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 CHN2P52757 468 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 LSAMPQ13449 338 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 TLR1Q15399 786 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 STEAP4Q687X5 459 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 ARPINQ7Z6K5 226 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 KBTBD6Q86V97 674 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 NME8Q8N427 588 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 GCOM2Q9BZD3 368 aaPredicted RBP28.22■■■□□ 2.11
CBX4-201ENST00000269397 MTMR10Q9NXD2 777 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 TXNDC16Q9P2K2 825 aa28.22■■■□□ 2.11
CBX4-201ENST00000269397 MAGED2Q9UNF1 606 aaPredicted RBP28.22■■■□□ 2.11
CBX4-201ENST00000269397 CPA3P15088 417 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 GRK2P25098 689 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 ATXN3P54252 364 aaPredicted RBP28.21■■■□□ 2.11
CBX4-201ENST00000269397 HACE1Q8IYU2 909 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 FAM167AQ96KS9 214 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 LENG8Q96PV6 779 aaPredicted RBP28.21■■■□□ 2.11
CBX4-201ENST00000269397 ARHGAP26Q9UNA1 814 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 DTNAQ9Y4J8 743 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 PTPRFP10586 1907 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 DPYSL4O14531 572 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 ALDH1A3P47895 512 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 TMC7Q7Z402 723 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 OR52B2Q96RD2 323 aa28.21■■■□□ 2.11
CBX4-201ENST00000269397 HCRTO43612 131 aa28.2■■■□□ 2.11
CBX4-201ENST00000269397 MTTPP55157 894 aa28.2■■■□□ 2.11
CBX4-201ENST00000269397 DEUP1Q05D60 604 aa28.2■■■□□ 2.11
CBX4-201ENST00000269397 KLF10Q13118 480 aa28.2■■■□□ 2.11
CBX4-201ENST00000269397 PDCD2Q16342 344 aaPredicted RBP28.2■■■□□ 2.11
CBX4-201ENST00000269397 PPM1LQ5SGD2 360 aa28.2■■■□□ 2.11
CBX4-201ENST00000269397 ARMC3Q5W041 872 aa28.2■■■□□ 2.11
CBX4-201ENST00000269397 NCBP2-AS2Q69YL0 99 aa28.2■■■□□ 2.11
CBX4-201ENST00000269397 C12orf42Q96LP6 360 aa28.2■■■□□ 2.11
CBX4-201ENST00000269397 GPR20Q99678 358 aa28.2■■■□□ 2.11
CBX4-201ENST00000269397 SLC4A7Q9Y6M7 1214 aa28.2■■■□□ 2.11
CBX4-201ENST00000269397 TMEM132DQ14C87 1099 aa28.2■■■□□ 2.1
CBX4-201ENST00000269397 LARP7Q4G0J3 582 aaKnown RBP eCLIP28.2■■■□□ 2.1
CBX4-201ENST00000269397 MRPL45Q9BRJ2 306 aaKnown RBP28.2■■■□□ 2.1
CBX4-201ENST00000269397 CAB39LQ9H9S4 337 aa28.2■■■□□ 2.1
CBX4-201ENST00000269397 SNX15Q9NRS6 342 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms