RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SLC44A1Q8WWI5 657 aa20.35■□□□□ 0.85
CSPG5-201ENST00000264723 PRR11Q96HE9 360 aaPredicted RBP20.35■□□□□ 0.85
CSPG5-201ENST00000264723 CENPKQ9BS16 269 aa20.35■□□□□ 0.85
CSPG5-201ENST00000264723 PNPOQ9NVS9 261 aa20.35■□□□□ 0.85
CSPG5-201ENST00000264723 FAM8A1Q9UBU6 413 aa20.35■□□□□ 0.85
CSPG5-201ENST00000264723 PFDN6O15212 129 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 B4GALT4O60513 344 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 AKR1A1P14550 325 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 KIF19Q2TAC6 998 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 KRT80Q6KB66 452 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 RIPOR1Q6ZS17 1223 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 CLEC4CQ8WTT0 213 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 ADAM2Q99965 735 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 PHGDHO43175 533 aaKnown RBP20.34■□□□□ 0.85
CSPG5-201ENST00000264723 HCRTO43612 131 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 SETSIPP0DME0 302 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 WLSQ5T9L3 541 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 OVOS1Q6IE37 1185 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 EFHBQ8N7U6 833 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 CMTM5Q96DZ9 223 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 FRMD8P1Q9BZ68 369 aaPredicted RBP20.34■□□□□ 0.85
CSPG5-201ENST00000264723 XPNPEP3Q9NQH7 507 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 BCAP29Q9UHQ4 241 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 STX1BP61266 288 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 SLC10A6Q3KNW5 377 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 DUSP28Q4G0W2 176 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 TSHZ1Q6ZSZ6 1077 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 RNF180Q86T96 592 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 CEP70Q8NHQ1 597 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 GPBP1L1Q9HC44 474 aaPredicted RBP20.34■□□□□ 0.85
CSPG5-201ENST00000264723 PRDM5Q9NQX1 630 aaPredicted RBP20.34■□□□□ 0.85
CSPG5-201ENST00000264723 CHST12Q9NRB3 414 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 CACNG4Q9UBN1 327 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 MID2Q9UJV3 735 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 ANGPTL3Q9Y5C1 460 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 CDY2AQ9Y6F7 541 aa20.34■□□□□ 0.85
CSPG5-201ENST00000264723 GLRA3O75311 464 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 ENDOD1O94919 500 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 TPBGLP0DKB5 382 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 DSG1Q02413 1049 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 NOMO1Q15155 1222 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 TMCO4Q5TGY1 634 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 PDPK2PQ6A1A2 396 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 IYDQ6PHW0 289 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 MPP5Q8N3R9 675 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 RPRD1AQ96P16 312 aaPredicted RBP20.33■□□□□ 0.85
CSPG5-201ENST00000264723 MAGEB5Q9BZ81 275 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 CAB39LQ9H9S4 337 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 TRPC7Q9HCX4 862 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 EPS15L1Q9UBC2 864 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 PLA2G4CQ9UP65 541 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 CLGNO14967 610 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 SH3BP5O60239 455 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 NME5P56597 212 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 EFEMP1Q12805 493 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 WDTC1Q8N5D0 677 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 BANPQ8N9N5 519 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 PDZD7Q9H5P4 517 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 THAP1Q9NVV9 213 aa20.33■□□□□ 0.85
CSPG5-201ENST00000264723 A0A0G2JLL6 359 aaPredicted RBP20.33■□□□□ 0.84
CSPG5-201ENST00000264723 DPPA5A6NC42 116 aa20.33■□□□□ 0.84
CSPG5-201ENST00000264723 ASPAP45381 313 aa20.33■□□□□ 0.84
CSPG5-201ENST00000264723 POU6F1Q14863 301 aa20.33■□□□□ 0.84
CSPG5-201ENST00000264723 TMEM63BQ5T3F8 832 aa20.33■□□□□ 0.84
CSPG5-201ENST00000264723 RNF220Q5VTB9 566 aa20.33■□□□□ 0.84
CSPG5-201ENST00000264723 PRRT2Q7Z6L0 340 aaPredicted RBP20.33■□□□□ 0.84
CSPG5-201ENST00000264723 IFNEQ86WN2 208 aa20.33■□□□□ 0.84
CSPG5-201ENST00000264723 PAPSS1O43252 624 aaPredicted RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 HOXC6P09630 235 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 PTPN1P18031 435 aaKnown RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 PKNOX1P55347 436 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 ZNF252P-AS1Q0IIN9 211 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 TRIML2Q8N7C3 387 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 NAT8LQ8N9F0 302 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 PPTC7Q8NI37 304 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 EBF4Q9BQW3 602 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 PRDM12Q9H4Q4 367 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 PAPOLBQ9NRJ5 636 aaKnown RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 GLTPD2A6NH11 291 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 ZBTB48P10074 688 aaPredicted RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 SKIV2L2P42285 1042 aaKnown RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 PAPOLAP51003 745 aaKnown RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 KPNA2P52292 529 aaKnown RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 PARP6Q2NL67 630 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 ACSBG2Q5FVE4 666 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 ABTB1Q969K4 478 aaPredicted RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 SOX13Q9UN79 622 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 TPST1O60507 370 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 EDN1P05305 212 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 SMPD1P17405 629 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 GMPRP36959 345 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 GSCP56915 257 aaPredicted RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 TAF2Q6P1X5 1199 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 ZC3H15Q8WU90 426 aaKnown RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 UCMAQ8WVF2 138 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 ELMO2Q96JJ3 720 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 SUDS3Q9H7L9 328 aaPredicted RBP20.32■□□□□ 0.84
CSPG5-201ENST00000264723 CHADO15335 359 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 PEX11AO75192 247 aa20.32■□□□□ 0.84
CSPG5-201ENST00000264723 SEC24DO94855 1032 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms