RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CDK7P50613 346 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 IYDQ6PHW0 289 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 METTL7BQ6UX53 244 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 MTMR14Q8NCE2 650 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 HTR3CQ8WXA8 447 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 SPATA16Q9BXB7 569 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 DPEP3Q9H4B8 488 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 STK32BQ9NY57 414 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 UBP1Q9NZI7 540 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 BCLAF3A2AJT9 711 aaKnown RBP12.73□□□□□ -0.37
CHMP3-201ENST00000263856 ITGAXP20702 1163 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 IRF9Q00978 393 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 ACAP1Q15027 740 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 SLC9B1Q4ZJI4 515 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 PLD6Q8N2A8 252 aaKnown RBP12.73□□□□□ -0.37
CHMP3-201ENST00000263856 TFB1MQ8WVM0 346 aaKnown RBP12.73□□□□□ -0.37
CHMP3-201ENST00000263856 SCYL1Q96KG9 808 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 FAM167AQ96KS9 214 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 COG4Q9H9E3 785 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 RNF103O00237 685 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 BUD23O43709 281 aaKnown RBP12.73□□□□□ -0.37
CHMP3-201ENST00000263856 IL18RAPO95256 599 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 CPA3P15088 417 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 VCLP18206 1134 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 RABGGTBP53611 331 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 ABCE1P61221 599 aaKnown RBP12.73□□□□□ -0.37
CHMP3-201ENST00000263856 SLC6A3Q01959 620 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 MBTD1Q05BQ5 628 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 GRM1Q13255 1194 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 PDK3Q15120 406 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 SLC10A6Q3KNW5 377 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 KYAT3Q6YP21 454 aaKnown RBP12.73□□□□□ -0.37
CHMP3-201ENST00000263856 PTAR1Q7Z6K3 402 aaPredicted RBP12.73□□□□□ -0.37
CHMP3-201ENST00000263856 PDSS2Q86YH6 399 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 OR52K1Q8NGK4 314 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 CMTM5Q96DZ9 223 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 KCTD15Q96SI1 283 aaPredicted RBP12.73□□□□□ -0.37
CHMP3-201ENST00000263856 DTLQ9NZJ0 730 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 KLHL8Q9P2G9 620 aaPredicted RBP12.73□□□□□ -0.37
CHMP3-201ENST00000263856 DTNAQ9Y4J8 743 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 BRWD3Q6RI45 1802 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 BIRC5O15392 142 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 MFSD11O43934 449 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 RTN3O95197 1032 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-201ENST00000263856 SPATA31D3P0C874 917 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 TPH1P17752 444 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 AOC1P19801 751 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 EPHA3P29320 983 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 OAZ1P54368 228 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 TBCCQ15814 346 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 SPATA31D4Q6ZUB0 917 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 ARCQ7LC44 396 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 STRA8Q7Z7C7 330 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 CSPG4P5Q96PW8 444 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 AGAP2Q99490 1192 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 VCX3BQ9H321 246 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 OCEL1Q9H607 264 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 GBA2Q9HCG7 927 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-201ENST00000263856 VCX3AQ9NNX9 186 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 PDGFCQ9NRA1 345 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 FER1L6Q2WGJ9 1857 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 PFKMP08237 780 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 COX4I1P13073 169 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 UQCRBP14927 111 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 MX2P20592 715 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 RXRBP28702 533 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 IFRD2Q12894 506 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-201ENST00000263856 MSLNQ13421 630 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-201ENST00000263856 CNGA3Q16281 694 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 HSP90AA5PQ58FG0 334 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 TMCO4Q5TGY1 634 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 MTHFD1LQ6UB35 978 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 OLFML1Q6UWY5 402 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 SNX32Q86XE0 403 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 SPNS2Q8IVW8 549 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 APLFQ8IW19 511 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-201ENST00000263856 DCLK2Q8N568 766 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 DNERQ8NFT8 737 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 TMA16Q96EY4 203 aaKnown RBP12.72□□□□□ -0.37
CHMP3-201ENST00000263856 LENG8Q96PV6 779 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-201ENST00000263856 OR52B2Q96RD2 323 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 NDNQ99608 321 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 GPR20Q99678 358 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 FRMD8Q9BZ67 464 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-201ENST00000263856 COPS7BQ9H9Q2 264 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-201ENST00000263856 DDX18Q9NVP1 670 aaKnown RBP12.72□□□□□ -0.37
CHMP3-201ENST00000263856 IRAK4Q9NWZ3 460 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 GGA3Q9NZ52 723 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 COPG2Q9UBF2 871 aa12.72□□□□□ -0.37
CHMP3-201ENST00000263856 ZBTB14O43829 449 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 ENDOD1O94919 500 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 CHRNGP07510 517 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 ARF4P18085 180 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-201ENST00000263856 L1CAMP32004 1257 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 GRIA2P42262 883 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 RPS6KA3P51812 740 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 FOLH1Q04609 750 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 SOWAHAQ2M3V2 549 aa12.71□□□□□ -0.37
CHMP3-201ENST00000263856 SLC9A4Q6AI14 798 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms