RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 HOXC11O43248 304 aaPredicted RBP18.97■□□□□ 0.63
SDF4-201ENST00000263741 IPO7O95373 1038 aaKnown RBP18.97■□□□□ 0.63
SDF4-201ENST00000263741 HOXD9P28356 352 aaPredicted RBP18.97■□□□□ 0.63
SDF4-201ENST00000263741 GAD2Q05329 585 aa18.97■□□□□ 0.63
SDF4-201ENST00000263741 NR1H3Q13133 447 aa18.97■□□□□ 0.63
SDF4-201ENST00000263741 UBXN2BQ14CS0 331 aa18.97■□□□□ 0.63
SDF4-201ENST00000263741 RALGPS2Q86X27 583 aaPredicted RBP18.97■□□□□ 0.63
SDF4-201ENST00000263741 FAM3CQ92520 227 aa18.97■□□□□ 0.63
SDF4-201ENST00000263741 ANKRD7Q92527 254 aa18.97■□□□□ 0.63
SDF4-201ENST00000263741 AZIN2Q96A70 460 aa18.97■□□□□ 0.63
SDF4-201ENST00000263741 UVRAGQ9P2Y5 699 aa18.97■□□□□ 0.63
SDF4-201ENST00000263741 SLC12A6Q9UHW9 1150 aa18.97■□□□□ 0.63
SDF4-201ENST00000263741 TBL1XO60907 577 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 TARSP26639 723 aaKnown RBP18.96■□□□□ 0.63
SDF4-201ENST00000263741 MIPP30301 263 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 NUMBP49757 651 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 AUHQ13825 339 aaKnown RBP18.96■□□□□ 0.63
SDF4-201ENST00000263741 C10orf76Q5T2E6 689 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 PYROXD2Q8N2H3 581 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 WFDC5Q8TCV5 224 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 TSC1Q92574 1164 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 IGSF8Q969P0 613 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 MFSD1Q9H3U5 465 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 C8orf33Q9H7E9 229 aaPredicted RBP18.96■□□□□ 0.63
SDF4-201ENST00000263741 C11orf16Q9NQ32 467 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 DNAJC17Q9NVM6 304 aaKnown RBP18.96■□□□□ 0.63
SDF4-201ENST00000263741 MARK1Q9P0L2 795 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 TRIM10Q9UDY6 481 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 DUSP10Q9Y6W6 482 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 KMT2EQ8IZD2 1858 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 F5H5T6 163 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 MYO1FO00160 1098 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 DLL1O00548 723 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 TULP3O75386 442 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 PENKP01210 267 aaPredicted RBP18.96■□□□□ 0.63
SDF4-201ENST00000263741 CYBBP04839 570 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 ADRA1BP35368 520 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 PRKCQQ04759 706 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 CWF19L1Q69YN2 538 aaKnown RBP18.96■□□□□ 0.63
SDF4-201ENST00000263741 FBXL22Q6P050 247 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 CYP4V2Q6ZWL3 525 aaPredicted RBP18.96■□□□□ 0.63
SDF4-201ENST00000263741 ETFBKMTQ8IXQ9 262 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 TMA16Q96EY4 203 aaKnown RBP18.96■□□□□ 0.63
SDF4-201ENST00000263741 LACRTQ9GZZ8 138 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 GOLPH3Q9H4A6 298 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 IP6K2Q9UHH9 426 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 SALL4Q9UJQ4 1053 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 INTUQ9ULD6 942 aa18.96■□□□□ 0.63
SDF4-201ENST00000263741 FAM72CH0Y354 149 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 CACNG3O60359 315 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 RNF8O76064 485 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 MESDQ14696 234 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 SMTNL2Q2TAL5 461 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 FAM72AQ5TYM5 149 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 TXNRD3NBQ6F5E7 133 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 FAM72DQ6L9T8 149 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 KIAA1328Q86T90 577 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 FAM72BQ86X60 149 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 RPRD1AQ96P16 312 aaPredicted RBP18.95■□□□□ 0.62
SDF4-201ENST00000263741 RBM12Q9NTZ6 932 aaKnown RBP18.95■□□□□ 0.62
SDF4-201ENST00000263741 HYOU1Q9Y4L1 999 aa18.95■□□□□ 0.62
SDF4-201ENST00000263741 DESP17661 470 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 IL1R2P27930 398 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 GJC1P36383 396 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 GALK1P51570 392 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 STARD6P59095 220 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 CA9Q16790 459 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 MPPE1Q53F39 396 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 ASTLQ6HA08 431 aaPredicted RBP18.94■□□□□ 0.62
SDF4-201ENST00000263741 FSTL4Q6MZW2 842 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 ZNF852Q6ZMS4 543 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 SLFN11Q7Z7L1 901 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 HJURPQ8NCD3 748 aaPredicted RBP18.94■□□□□ 0.62
SDF4-201ENST00000263741 EZH1Q92800 747 aaPredicted RBP18.94■□□□□ 0.62
SDF4-201ENST00000263741 CD101Q93033 1021 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 P2RY13Q9BPV8 354 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 DDX50Q9BQ39 737 aaKnown RBP18.94■□□□□ 0.62
SDF4-201ENST00000263741 SNRNP25Q9BV90 132 aaKnown RBP18.94■□□□□ 0.62
SDF4-201ENST00000263741 LTB4R2Q9NPC1 389 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 KCND1Q9NSA2 647 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 KANSL1LA0AUZ9 987 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 BUB1O43683 1085 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 SRGAP2O75044 1071 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 SSR1P43307 286 aaKnown RBP18.94■□□□□ 0.62
SDF4-201ENST00000263741 NOP2P46087 812 aaKnown RBP18.94■□□□□ 0.62
SDF4-201ENST00000263741 VAV2P52735 878 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 PIGHQ14442 188 aaPredicted RBP18.94■□□□□ 0.62
SDF4-201ENST00000263741 ARL13BQ3SXY8 428 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 KCNT1Q5JUK3 1230 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 ARTNQ5T4W7 220 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 RHOT2Q8IXI1 618 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 SHDQ96IW2 340 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 ZWILCHQ9H900 591 aa18.94■□□□□ 0.62
SDF4-201ENST00000263741 LUC7LQ9NQ29 371 aaKnown RBP18.94■□□□□ 0.62
SDF4-201ENST00000263741 ARHGAP6O43182 974 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 CNTN5O94779 1100 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 EGFP01133 1207 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 ZNF683Q8IZ20 524 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 CARNMT1Q8N4J0 409 aa18.93■□□□□ 0.62
SDF4-201ENST00000263741 NIPA2Q8N8Q9 360 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms