RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 AXLP30530 894 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 MARCKSL1P49006 195 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 SCNN1BP51168 640 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 RHOAP61586 193 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 UBE3AQ05086 875 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 PARP6Q2NL67 630 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 ZACNQ401N2 412 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 TCHHL1Q5QJ38 904 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 RNF43Q68DV7 783 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CRELD2Q6UXH1 353 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 SNX32Q86XE0 403 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 GDPD5Q8WTR4 605 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 TNFRSF25Q93038 417 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 TADA1Q96BN2 335 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 FBXO44Q9H4M3 255 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 ETNK2Q9NVF9 386 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 ANKRD26Q9UPS8 1709 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 ASTN2O75129 1339 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 NRXN3Q9Y4C0 1643 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 SAC3D1A6NKF1 404 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 C2CD2LO14523 706 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 PROCP04070 461 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CKMP06732 381 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 ALOX15P16050 662 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 RAP1GDS1P52306 607 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 TGFB2P61812 414 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 ELAVL2Q12926 359 aaKnown RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 FASTKQ14296 549 aaKnown RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 GRIK5Q16478 980 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 PDK4Q16654 411 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 SCARA3Q6AZY7 606 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CES3Q6UWW8 571 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 BBS12Q6ZW61 710 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 DHFR2Q86XF0 187 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 FAM120BQ96EK7 910 aaKnown RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 SMARCD1Q96GM5 515 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 MAML3Q96JK9 1138 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 ZNF184Q99676 751 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 APBA2Q99767 749 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 ELOVL6Q9H5J4 265 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 VTA1Q9NP79 307 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 PIH1D1Q9NWS0 290 aaKnown RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 FAM198AQ9UFP1 575 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 VPS28Q9UK41 221 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CLCA2Q9UQC9 943 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 NDUFAF1Q9Y375 327 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 TIMM13Q9Y5L4 95 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 UBIAD1Q9Y5Z9 338 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CASTOR2A6NHX0 329 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 GRIN3BO60391 1043 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 KPNA6O60684 536 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CELF2O95319 508 aaKnown RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 KRT6AP02538 564 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 KRT6BP04259 564 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CYP1A1P04798 512 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 MYL4P12829 197 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 RPL22P35268 128 aaKnown RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 MLH1P40692 756 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 KRT6CP48668 564 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 TMEM132BQ14DG7 1078 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 HYIQ5T013 277 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 RIPOR1Q6ZS17 1223 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 TMC7Q7Z402 723 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 PHF13Q86YI8 300 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 FBXO39Q8N4B4 442 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 OSCP1Q8WVF1 389 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CASP10Q92851 521 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 ABHD8Q96I13 439 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CDRT15Q96T59 188 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 BDH2Q9BUT1 245 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 SLC25A23Q9BV35 468 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 WDR18Q9BV38 432 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 BBS2Q9BXC9 721 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 TAS2R13Q9NYV9 303 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 RNF225M0QZC1 329 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 TGFB1I1O43294 461 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 TNFAIP8O95379 198 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 SPATA31C1P0DKV0 1188 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 MBL2P11226 248 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 AKAP5P24588 427 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CCDC15Q0P6D6 951 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 MSLNQ13421 630 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 UNC93AQ86WB7 457 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 ALLCQ8N6M5 410 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 C4orf32Q8N8J7 132 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 SNRNP27Q8WVK2 155 aaKnown RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 PRCCQ92733 491 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 EMILIN2Q9BXX0 1053 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 POPDC2Q9HBU9 364 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 DMAP1Q9NPF5 467 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 CYP39A1Q9NYL5 469 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 SAE1Q9UBE0 346 aaPredicted RBP10.99□□□□□ -0.65
CD44-201ENST00000263398 MON2Q7Z3U7 1717 aa10.99□□□□□ -0.65
CD44-201ENST00000263398 CNTNAP2Q9UHC6 1331 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 A0A0A0MRY4 1105 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 WNT7AO00755 349 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 LRG1P02750 347 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 ITGAVP06756 1048 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 DRD4P21917 467 aa10.98□□□□□ -0.65
CD44-201ENST00000263398 TUBP50607 506 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms