RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PIGNO95427 931 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 MPOP05164 745 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 ERCC2P18074 760 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 MADCAM1Q13477 382 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 STARD3Q14849 445 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 FGD3Q5JSP0 725 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 MFSD14CQ5VZR4 134 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 KCNV1Q6PIU1 500 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 NANOGNBQ7Z5D8 188 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 AMIGO2Q86SJ2 522 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 SLC41A1Q8IVJ1 513 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 FBXO16Q8IX29 292 aaPredicted RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 CKAP2Q8WWK9 683 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 CNPY3Q9BT09 278 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 COPG2Q9UBF2 871 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 PXDNLA1KZ92 1463 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 LMTK2Q8IWU2 1503 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 SMIM22K7EJ46 135 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 LYPLA1O75608 230 aaPredicted RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 B3GAT3O94766 335 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 CARTPTQ16568 116 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 LPCAT4Q643R3 524 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 MPZL3Q6UWV2 235 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 DHRSXQ8N5I4 330 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 LPCAT1Q8NF37 534 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 ZNF606Q8WXB4 792 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 SPATA16Q9BXB7 569 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 RBM22Q9NW64 420 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMG6-201ENST00000263073 GGA3Q9NZ52 723 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 EHD3Q9NZN3 535 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 TSPAN16Q9UKR8 245 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 PPRC1Q5VV67 1664 aaKnown RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 MOXD2PA6NHM9 499 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 BUD23O43709 281 aaKnown RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 SEC22BO75396 215 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 UNC5CO95185 931 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 DRD4P21917 467 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 TKTL1P51854 596 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 CASP5P51878 434 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 SNRPFP62306 86 aaKnown RBP12.32□□□□□ -0.44
SMG6-201ENST00000263073 GPR107Q5VW38 600 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 TMC7Q7Z402 723 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 OMDQ99983 421 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 ELOVL6Q9H5J4 265 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 ACTR8Q9H981 624 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 DSEQ9UL01 958 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
SMG6-201ENST00000263073 TNS3Q68CZ2 1445 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 AKAP5P24588 427 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 PTPN11Q06124 597 aaPredicted RBP12.31□□□□□ -0.44
SMG6-201ENST00000263073 ITPK1Q13572 414 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 RNF220Q5VTB9 566 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 ILDR2Q71H61 639 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 MILR1Q7Z6M3 343 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 TXNRD3Q86VQ6 643 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 LPAR1Q92633 364 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 EMID1Q96A84 441 aaPredicted RBP12.31□□□□□ -0.44
SMG6-201ENST00000263073 TADA1Q96BN2 335 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 OLFM1Q99784 485 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 BDH2Q9BUT1 245 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 NUDT5Q9UKK9 219 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 MADDQ8WXG6 1647 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 ADIGQ0VDE8 80 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 GRTP1Q5TC63 336 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 SCIMPQ6UWF3 145 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 ATP6V0D2Q8N8Y2 350 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 PSMA8Q8TAA3 256 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 ITFG1Q8TB96 612 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 CLPBQ9H078 707 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 AVENQ9NQS1 362 aaPredicted RBP12.31□□□□□ -0.44
SMG6-201ENST00000263073 MRGBPQ9NV56 204 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 RRN3Q9NYV6 651 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 RBP1P09455 135 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 ZNF286BP0CG31 522 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 CNTFP26441 200 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 NDST1P52848 882 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 KRR1Q13601 381 aaKnown RBP12.31□□□□□ -0.44
SMG6-201ENST00000263073 DGUOKQ16854 277 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 USP39Q53GS9 565 aaKnown RBP12.31□□□□□ -0.44
SMG6-201ENST00000263073 TDRD10Q5VZ19 366 aaKnown RBP12.31□□□□□ -0.44
SMG6-201ENST00000263073 VPS33AQ96AX1 596 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 CDHR5Q9HBB8 845 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 PARVBQ9HBI1 364 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 N6AMT1Q9Y5N5 214 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 IQSEC2Q5JU85 1478 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 GPR75-ASB3A0A0A6YYF3 556 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 HBP1O60381 514 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 BMP6P22004 513 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 FMO4P31512 558 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 ST13P50502 369 aaKnown RBP12.31□□□□□ -0.44
SMG6-201ENST00000263073 PRKAA1Q13131 559 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 DCTN2Q13561 401 aaKnown RBP12.31□□□□□ -0.44
SMG6-201ENST00000263073 DPYSL3Q14195 570 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 ETNPPLQ8TBG4 499 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 RGS18Q9NS28 235 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 AFF2P51816 1311 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 F5H5T6 163 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 TPBGLP0DKB5 382 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 C15orf59Q2T9L4 293 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms