RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NADSYN1Q6IA69 706 aa28.43■■■□□ 2.14
SMARCD3-201ENST00000262188 C14orf80Q86SX3 495 aa28.43■■■□□ 2.14
SMARCD3-201ENST00000262188 SH3RF2Q8TEC5 729 aa28.43■■■□□ 2.14
SMARCD3-201ENST00000262188 ARFGAP3Q9NP61 516 aa28.43■■■□□ 2.14
SMARCD3-201ENST00000262188 LEFTY2O00292 366 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 GREM1O60565 184 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 DDX6P26196 483 aaKnown RBP eCLIP28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 RING1Q06587 406 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 ADCY2Q08462 1091 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 DPYSL3Q14195 570 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 KAZNQ674X7 775 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 ADAT2Q7Z6V5 191 aaKnown RBP28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 DDX56Q9NY93 547 aaKnown RBP28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 TRDMT1O14717 391 aaKnown RBP28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 GOT1P17174 413 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 SCAPQ12770 1279 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 RAP1GAP2Q684P5 730 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 EXD1Q8NHP7 514 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 RSPRY1Q96DX4 576 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 MYADMQ96S97 322 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 OR12D3Q9UGF7 316 aa28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 USP15Q9Y4E8 981 aaPredicted RBP28.42■■■□□ 2.14
SMARCD3-201ENST00000262188 TCRBV7S2A1N4TA0A589 114 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 IL4RP24394 825 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 VIPR2P41587 438 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 DPYSL2Q16555 572 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 ODF2Q5BJF6 829 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 MS4A13Q5J8X5 152 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 SPOCD1Q6ZMY3 1216 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 PLD4Q96BZ4 506 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 UBE2ZQ9H832 354 aaPredicted RBP28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 TDP1Q9NUW8 608 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 CD207Q9UJ71 328 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 AGO1Q9UL18 857 aaKnown RBP28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 ARHGAP26Q9UNA1 814 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 HARS2P49590 506 aaKnown RBP28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 KPNA1P52294 538 aaPredicted RBP28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 FAM78AQ5JUQ0 283 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 ARTNQ5T4W7 220 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 NUGGCQ68CJ6 796 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 RFWD3Q6PCD5 774 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 LRRC3BQ96PB8 259 aa28.41■■■□□ 2.14
SMARCD3-201ENST00000262188 HELZP42694 1942 aaKnown RBP28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 GRXCR2A6NFK2 248 aa28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 SLC2A3P11169 496 aa28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 SLC6A4P31645 630 aa28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 CDKN2BP42772 138 aa28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 IRAK1P51617 712 aa28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 VCPP55072 806 aaKnown RBP28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 ATP6V0D2Q8N8Y2 350 aa28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 BTN2A3PQ96KV6 586 aa28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 CARD9Q9H257 536 aa28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 MFHAS1Q9Y4C4 1052 aa28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 COL6A3P12111 3177 aa28.4■■■□□ 2.14
SMARCD3-201ENST00000262188 RCOR2Q8IZ40 523 aa28.39■■■□□ 2.14
SMARCD3-201ENST00000262188 RIPOR3Q96MK2 946 aa28.39■■■□□ 2.14
SMARCD3-201ENST00000262188 VANGL2Q9ULK5 521 aa28.39■■■□□ 2.14
SMARCD3-201ENST00000262188 DOCK8Q8NF50 2099 aa28.39■■■□□ 2.14
SMARCD3-201ENST00000262188 PDE2AO00408 941 aaPredicted RBP28.39■■■□□ 2.13
SMARCD3-201ENST00000262188 TCP1P17987 556 aaKnown RBP28.39■■■□□ 2.13
SMARCD3-201ENST00000262188 SEMA3BQ13214 749 aa28.39■■■□□ 2.13
SMARCD3-201ENST00000262188 FAM133BQ5BKY9 247 aaKnown RBP28.39■■■□□ 2.13
SMARCD3-201ENST00000262188 CREG2Q8IUH2 290 aa28.39■■■□□ 2.13
SMARCD3-201ENST00000262188 UNC45BQ8IWX7 931 aa28.39■■■□□ 2.13
SMARCD3-201ENST00000262188 BBS7Q8IWZ6 715 aa28.39■■■□□ 2.13
SMARCD3-201ENST00000262188 NETO2Q8NC67 525 aa28.39■■■□□ 2.13
SMARCD3-201ENST00000262188 HAPLN3Q96S86 360 aa28.39■■■□□ 2.13
SMARCD3-201ENST00000262188 LRIG2O94898 1065 aa28.38■■■□□ 2.13
SMARCD3-201ENST00000262188 GBP2P32456 591 aaPredicted RBP28.38■■■□□ 2.13
SMARCD3-201ENST00000262188 DYNLT1P63172 113 aa28.38■■■□□ 2.13
SMARCD3-201ENST00000262188 RBM41Q96IZ5 413 aaKnown RBP28.38■■■□□ 2.13
SMARCD3-201ENST00000262188 SH3BP1Q9Y3L3 701 aa28.38■■■□□ 2.13
SMARCD3-201ENST00000262188 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 ACSL4O60488 711 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 TSPAN3O60637 253 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 MLLT6P55198 1093 aaPredicted RBP28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 AUHQ13825 339 aaKnown RBP28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 SEL1L2Q5TEA6 688 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 CHSY1Q86X52 802 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 CIR1Q86X95 450 aaPredicted RBP28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 ASB16Q96NS5 453 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 CSPG4P5Q96PW8 444 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 ETNK2Q9NVF9 386 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 SLC12A6Q9UHW9 1150 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 CDH7Q9ULB5 785 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 hCG_1818297A0A087WSY0 165 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 FGGP02679 453 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 PFKLP17858 780 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 AMPD1P23109 780 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 SGSHP51688 502 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 AIF1P55008 147 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 Q6ZNB5 142 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 PCDH19Q8TAB3 1148 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 FAM71BQ8TC56 605 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 P2RY11Q96G91 374 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 PBKQ96KB5 322 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 PRMT1Q99873 361 aaKnown RBP28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 OSBPL8Q9BZF1 889 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 OSBPL2Q9H1P3 480 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 MPP6Q9NZW5 540 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms